Protein–RNA interactions for Protein: P62857

RPS28, 40S ribosomal protein S28, humanhuman

Known RBP Predictions only

Length 69 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28P62857 RNA5SP75-201ENST00000516841 111 ntBASIC1.57□□□□□ -2.16
RPS28P62857 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC1.57□□□□□ -2.16
RPS28P62857 AC021006.3-201ENST00000530771 192 ntBASIC1.57□□□□□ -2.16
RPS28P62857 AC092490.3-201ENST00000545370 572 ntBASIC1.57□□□□□ -2.16
RPS28P62857 GTF2IP8-201ENST00000560687 584 ntBASIC1.57□□□□□ -2.16
RPS28P62857 SPATA8-AS1-202ENST00000560888 392 ntTSL 5 BASIC1.57□□□□□ -2.16
RPS28P62857 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC1.57□□□□□ -2.16
RPS28P62857 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC1.57□□□□□ -2.16
RPS28P62857 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC1.57□□□□□ -2.16
RPS28P62857 CYCSP39-201ENST00000565821 309 ntBASIC1.57□□□□□ -2.16
RPS28P62857 MIR4529-201ENST00000578110 78 ntBASIC1.57□□□□□ -2.16
RPS28P62857 AC015908.4-201ENST00000582334 575 ntTSL 4 BASIC1.57□□□□□ -2.16
RPS28P62857 AC005702.2-201ENST00000591035 481 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
RPS28P62857 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC1.57□□□□□ -2.16
RPS28P62857 RNA5SP440-201ENST00000612665 119 ntBASIC1.57□□□□□ -2.16
RPS28P62857 MIR6731-201ENST00000614863 72 ntBASIC1.57□□□□□ -2.16
RPS28P62857 AC073592.7-201ENST00000623659 507 ntBASIC1.57□□□□□ -2.16
RPS28P62857 AC098679.5-201ENST00000624394 571 ntBASIC1.57□□□□□ -2.16
RPS28P62857 AC025048.6-202ENST00000627667 438 ntBASIC1.57□□□□□ -2.16
RPS28P62857 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC1.57□□□□□ -2.16
RPS28P62857 AL354685.2-201ENST00000448218 1447 ntBASIC1.57□□□□□ -2.16
RPS28P62857 XIRP2-201ENST00000295237 5246 ntTSL 2 BASIC1.56□□□□□ -2.16
RPS28P62857 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPS28P62857 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RPS28P62857 CYLC2-202ENST00000487798 2053 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
RPS28P62857 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC1.56□□□□□ -2.16
RPS28P62857 MIR26A1-201ENST00000362205 77 ntBASIC1.56□□□□□ -2.16
RPS28P62857 RNU6-819P-201ENST00000364116 107 ntBASIC1.56□□□□□ -2.16
RPS28P62857 RNA5SP125-201ENST00000364843 120 ntBASIC1.56□□□□□ -2.16
RPS28P62857 MIR551B-201ENST00000384984 96 ntBASIC1.56□□□□□ -2.16
RPS28P62857 MIR301B-201ENST00000390813 78 ntBASIC1.56□□□□□ -2.16
RPS28P62857 CYB5AP4-201ENST00000396692 399 ntBASIC1.56□□□□□ -2.16
RPS28P62857 AC096664.2-201ENST00000411843 406 ntBASIC1.56□□□□□ -2.16
RPS28P62857 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC1.56□□□□□ -2.16
RPS28P62857 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC1.56□□□□□ -2.16
RPS28P62857 OR10R1P-201ENST00000441524 1141 ntBASIC1.56□□□□□ -2.16
RPS28P62857 AC112498.1-201ENST00000444401 332 ntBASIC1.56□□□□□ -2.16
RPS28P62857 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC1.56□□□□□ -2.16
RPS28P62857 BMI1P1-201ENST00000445879 941 ntBASIC1.56□□□□□ -2.16
RPS28P62857 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC1.56□□□□□ -2.16
RPS28P62857 AL136097.2-201ENST00000457003 333 ntTSL 2 BASIC1.56□□□□□ -2.16
RPS28P62857 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC1.56□□□□□ -2.16
RPS28P62857 GRM7-AS3-209ENST00000458713 454 ntTSL 3 BASIC1.56□□□□□ -2.16
RPS28P62857 PLGLA-201ENST00000465668 449 ntBASIC1.56□□□□□ -2.16
RPS28P62857 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC1.56□□□□□ -2.16
RPS28P62857 AC114786.4-201ENST00000508771 728 ntBASIC1.56□□□□□ -2.16
RPS28P62857 ATG10-208ENST00000513634 618 ntTSL 2 BASIC1.56□□□□□ -2.16
RPS28P62857 AC114797.1-201ENST00000514003 728 ntBASIC1.56□□□□□ -2.16
RPS28P62857 RNA5SP364-201ENST00000516938 78 ntBASIC1.56□□□□□ -2.16
RPS28P62857 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC1.56□□□□□ -2.16
RPS28P62857 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC1.56□□□□□ -2.16
RPS28P62857 AC104997.1-201ENST00000519761 717 ntBASIC1.56□□□□□ -2.16
RPS28P62857 AC137768.1-201ENST00000549998 553 ntBASIC1.56□□□□□ -2.16
RPS28P62857 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC1.56□□□□□ -2.16
RPS28P62857 AC005476.1-201ENST00000554427 397 ntBASIC1.56□□□□□ -2.16
RPS28P62857 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC1.56□□□□□ -2.16
RPS28P62857 AC015688.2-201ENST00000584523 262 ntBASIC1.56□□□□□ -2.16
RPS28P62857 RPL12P25-202ENST00000598100 674 ntBASIC1.56□□□□□ -2.16
RPS28P62857 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.56□□□□□ -2.16
RPS28P62857 MIR6768-201ENST00000610734 72 ntBASIC1.56□□□□□ -2.16
RPS28P62857 MIR6885-201ENST00000612241 66 ntBASIC1.56□□□□□ -2.16
RPS28P62857 AP005019.3-201ENST00000620418 560 ntBASIC1.56□□□□□ -2.16
RPS28P62857 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC1.56□□□□□ -2.16
RPS28P62857 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC1.56□□□□□ -2.16
RPS28P62857 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
RPS28P62857 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
RPS28P62857 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
RPS28P62857 AL158163.1-201ENST00000603915 1649 ntBASIC1.55□□□□□ -2.16
RPS28P62857 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.55□□□□□ -2.16
RPS28P62857 ZNF679-201ENST00000255746 1297 ntAPPRIS P1 TSL 1 (best) BASIC1.55□□□□□ -2.16
RPS28P62857 ENSAP3-201ENST00000312710 333 ntBASIC1.55□□□□□ -2.16
RPS28P62857 RNA5SP138-201ENST00000365098 114 ntBASIC1.55□□□□□ -2.16
RPS28P62857 RNA5SP397-201ENST00000391323 118 ntBASIC1.55□□□□□ -2.16
RPS28P62857 AL512604.1-201ENST00000404812 257 ntBASIC1.55□□□□□ -2.16
RPS28P62857 Z86062.1-201ENST00000406773 777 ntBASIC1.55□□□□□ -2.16
RPS28P62857 RN7SKP111-201ENST00000410349 271 ntBASIC1.55□□□□□ -2.16
RPS28P62857 AC023141.4-201ENST00000412031 328 ntBASIC1.55□□□□□ -2.16
RPS28P62857 SNORD56-201ENST00000413522 71 ntBASIC1.55□□□□□ -2.16
RPS28P62857 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.55□□□□□ -2.16
RPS28P62857 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 AL109913.1-201ENST00000421173 514 ntBASIC1.55□□□□□ -2.16
RPS28P62857 RPL31P63-201ENST00000422565 375 ntBASIC1.55□□□□□ -2.16
RPS28P62857 AC093106.2-201ENST00000428212 385 ntBASIC1.55□□□□□ -2.16
RPS28P62857 HMGB1P9-201ENST00000429856 646 ntBASIC1.55□□□□□ -2.16
RPS28P62857 AC018644.1-201ENST00000429934 551 ntBASIC1.55□□□□□ -2.16
RPS28P62857 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 AC005154.2-201ENST00000438110 379 ntBASIC1.55□□□□□ -2.16
RPS28P62857 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 ATP5C1P1-201ENST00000441945 895 ntBASIC1.55□□□□□ -2.16
RPS28P62857 AL513328.1-201ENST00000446460 224 ntBASIC1.55□□□□□ -2.16
RPS28P62857 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.55□□□□□ -2.16
RPS28P62857 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 RPS26P41-201ENST00000450370 284 ntBASIC1.55□□□□□ -2.16
RPS28P62857 ELOCP23-201ENST00000452014 332 ntBASIC1.55□□□□□ -2.16
RPS28P62857 YWHAEP1-201ENST00000453697 763 ntBASIC1.55□□□□□ -2.16
RPS28P62857 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC1.55□□□□□ -2.16
RPS28P62857 OR4G11P-201ENST00000492842 939 ntBASIC1.55□□□□□ -2.16
RPS28P62857 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC1.55□□□□□ -2.16
RPS28P62857 AC109464.2-201ENST00000510242 943 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms