Protein–RNA interactions for Protein: P62684

HERVK_113, Endogenous retrovirus group K member 113 Gag polyprotein, humanhuman

Predictions only

Length 666 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERVK_113P62684 AC092435.4-201ENST00000623012 4159 ntBASIC5□□□□□ -1.61
HERVK_113P62684 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
HERVK_113P62684 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HERVK_113P62684 PTER-201ENST00000298942 3448 ntTSL 5 BASIC4.99□□□□□ -1.61
HERVK_113P62684 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HERVK_113P62684 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HERVK_113P62684 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HERVK_113P62684 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HERVK_113P62684 RNU6-28P-201ENST00000362378 107 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 RNA5SP175-201ENST00000364275 119 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 RNA5SP130-201ENST00000364431 114 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 RNA5SP513-201ENST00000364648 118 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 RNU1-63P-201ENST00000383902 164 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 JKAMPP1-201ENST00000413804 919 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AL162151.2-201ENST00000448875 158 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AC132479.1-201ENST00000449160 144 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 ELOCP23-201ENST00000452014 332 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC4.99□□□□□ -1.61
HERVK_113P62684 AC092001.1-201ENST00000453012 261 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AC087312.1-201ENST00000471411 480 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AL136126.1-201ENST00000473603 402 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 RN7SL132P-201ENST00000478131 296 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AC023194.1-201ENST00000493084 308 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AP002812.1-201ENST00000495378 474 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AL592156.1-201ENST00000508758 304 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.99□□□□□ -1.61
HERVK_113P62684 AC099522.1-202ENST00000514718 367 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.99□□□□□ -1.61
HERVK_113P62684 RNU6-1281P-201ENST00000516223 105 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 RNU6-875P-201ENST00000516488 106 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 Vault.3-201ENST00000516676 95 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 RNU6-201P-201ENST00000517100 61 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.99□□□□□ -1.61
HERVK_113P62684 IGLV3-26-201ENST00000520756 302 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC4.99□□□□□ -1.61
HERVK_113P62684 AC104383.1-201ENST00000530297 370 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC4.99□□□□□ -1.61
HERVK_113P62684 AC123904.2-201ENST00000548059 300 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AL512310.1-201ENST00000548639 172 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 ARL1-211ENST00000551828 776 ntTSL 5 BASIC4.99□□□□□ -1.61
HERVK_113P62684 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC4.99□□□□□ -1.61
HERVK_113P62684 SUB1P2-201ENST00000556401 297 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC4.99□□□□□ -1.61
HERVK_113P62684 MIR4286-201ENST00000580651 93 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 MIR3158-1-201ENST00000583596 81 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AC112230.1-201ENST00000604342 547 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC4.99□□□□□ -1.61
HERVK_113P62684 CYP3A51P-201ENST00000633513 256 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.99□□□□□ -1.61
HERVK_113P62684 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.99□□□□□ -1.61
HERVK_113P62684 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HERVK_113P62684 AL445437.1-201ENST00000623157 3087 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.99□□□□□ -1.61
HERVK_113P62684 MAPK10-303ENST00000641324 3959 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HERVK_113P62684 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HERVK_113P62684 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC4.99□□□□□ -1.61
HERVK_113P62684 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
HERVK_113P62684 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC4.99□□□□□ -1.61
HERVK_113P62684 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
HERVK_113P62684 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
HERVK_113P62684 AL133243.3-201ENST00000617415 3004 ntBASIC4.99□□□□□ -1.61
HERVK_113P62684 CHORDC1-206ENST00000529987 1698 ntTSL 3 BASIC4.99□□□□□ -1.61
HERVK_113P62684 PHKBP1-201ENST00000450951 1951 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
HERVK_113P62684 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
HERVK_113P62684 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
HERVK_113P62684 Y_RNA.61-201ENST00000362835 102 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
HERVK_113P62684 RNU6-730P-201ENST00000383954 104 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 RNU6-1226P-201ENST00000384317 107 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 RNU6-1009P-201ENST00000390996 107 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 AL356421.1-201ENST00000403255 413 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 OR51A5P-201ENST00000415429 942 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 TRAPPC2P10-201ENST00000415662 323 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 MTND3P17-201ENST00000416968 344 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 AC016831.2-201ENST00000417179 352 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 HMGB3P20-201ENST00000417997 600 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 AC092755.1-201ENST00000441746 97 ntTSL 3 BASIC4.98□□□□□ -1.61
HERVK_113P62684 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.98□□□□□ -1.61
HERVK_113P62684 EIF4A1P11-201ENST00000451239 222 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC4.98□□□□□ -1.61
HERVK_113P62684 HMGB1P15-201ENST00000453854 435 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 RPL35AP15-201ENST00000468042 339 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 AP000852.1-201ENST00000472460 573 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 RN7SL604P-201ENST00000492589 296 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 AC079382.1-201ENST00000493346 557 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 AC018710.1-201ENST00000506509 158 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC4.98□□□□□ -1.61
HERVK_113P62684 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC4.98□□□□□ -1.61
HERVK_113P62684 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.98□□□□□ -1.61
HERVK_113P62684 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.98□□□□□ -1.61
HERVK_113P62684 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC4.98□□□□□ -1.61
HERVK_113P62684 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC4.98□□□□□ -1.61
HERVK_113P62684 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC4.98□□□□□ -1.61
HERVK_113P62684 AC121334.2-201ENST00000605387 271 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 RNU4-89P-201ENST00000607443 133 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 MIR6875-201ENST00000617506 72 ntBASIC4.98□□□□□ -1.61
HERVK_113P62684 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.98□□□□□ -1.61
HERVK_113P62684 PATJ-202ENST00000316485 3657 ntTSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms