Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 SNORD116-12-201ENST00000384468 92 ntBASIC3.38□□□□□ -1.87
SRP54P61011 MIR122-201ENST00000385044 85 ntBASIC3.38□□□□□ -1.87
SRP54P61011 RNA5SP293-201ENST00000410527 113 ntBASIC3.38□□□□□ -1.87
SRP54P61011 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.38□□□□□ -1.87
SRP54P61011 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.38□□□□□ -1.87
SRP54P61011 AC019178.2-201ENST00000423595 505 ntBASIC3.38□□□□□ -1.87
SRP54P61011 AC079780.1-201ENST00000428259 207 ntBASIC3.38□□□□□ -1.87
SRP54P61011 AC005300.1-201ENST00000428401 373 ntBASIC3.38□□□□□ -1.87
SRP54P61011 MTND2P5-201ENST00000432656 1006 ntBASIC3.38□□□□□ -1.87
SRP54P61011 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.38□□□□□ -1.87
SRP54P61011 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.38□□□□□ -1.87
SRP54P61011 AC007967.1-201ENST00000455422 1159 ntBASIC3.38□□□□□ -1.87
SRP54P61011 AF129075.1-201ENST00000457162 794 ntTSL 3 BASIC3.38□□□□□ -1.87
SRP54P61011 snoU109.3-201ENST00000459477 145 ntBASIC3.38□□□□□ -1.87
SRP54P61011 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC3.38□□□□□ -1.87
SRP54P61011 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC3.38□□□□□ -1.87
SRP54P61011 PRELID3BP6-201ENST00000503839 571 ntBASIC3.38□□□□□ -1.87
SRP54P61011 AC114981.1-201ENST00000503897 678 ntBASIC3.38□□□□□ -1.87
SRP54P61011 AC093297.2-207ENST00000505401 692 ntTSL 3 BASIC3.38□□□□□ -1.87
SRP54P61011 HMGB1P28-201ENST00000507778 552 ntBASIC3.38□□□□□ -1.87
SRP54P61011 PCBP2P3-201ENST00000509726 843 ntBASIC3.38□□□□□ -1.87
SRP54P61011 MTATP6P9-201ENST00000515039 680 ntBASIC3.38□□□□□ -1.87
SRP54P61011 SNORA31.8-201ENST00000516327 108 ntBASIC3.38□□□□□ -1.87
SRP54P61011 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.38□□□□□ -1.87
SRP54P61011 DUXAP6-201ENST00000553858 601 ntBASIC3.38□□□□□ -1.87
SRP54P61011 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.38□□□□□ -1.87
SRP54P61011 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC3.38□□□□□ -1.87
SRP54P61011 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.38□□□□□ -1.87
SRP54P61011 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.38□□□□□ -1.87
SRP54P61011 AP001029.3-201ENST00000588063 596 ntBASIC3.38□□□□□ -1.87
SRP54P61011 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.38□□□□□ -1.87
SRP54P61011 AL110115.1-201ENST00000614396 364 ntBASIC3.38□□□□□ -1.87
SRP54P61011 AC009269.6-201ENST00000621778 588 ntBASIC3.38□□□□□ -1.87
SRP54P61011 AC091953.5-201ENST00000622919 233 ntBASIC3.38□□□□□ -1.87
SRP54P61011 AC004009.2-201ENST00000623016 728 ntBASIC3.38□□□□□ -1.87
SRP54P61011 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
SRP54P61011 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.38□□□□□ -1.87
SRP54P61011 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.38□□□□□ -1.87
SRP54P61011 AL445984.1-201ENST00000637834 659 ntBASIC3.38□□□□□ -1.87
SRP54P61011 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SRP54P61011 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.38□□□□□ -1.87
SRP54P61011 AC118273.1-201ENST00000525324 3006 ntBASIC3.38□□□□□ -1.87
SRP54P61011 AC097714.1-201ENST00000511272 1647 ntBASIC3.37□□□□□ -1.87
SRP54P61011 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SRP54P61011 TAS2R30-201ENST00000539585 1687 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SRP54P61011 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
SRP54P61011 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
SRP54P61011 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SRP54P61011 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.37□□□□□ -1.87
SRP54P61011 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SRP54P61011 RNU6-1155P-201ENST00000363554 107 ntBASIC3.37□□□□□ -1.87
SRP54P61011 RNU6-283P-201ENST00000364788 107 ntBASIC3.37□□□□□ -1.87
SRP54P61011 RNU6-805P-201ENST00000365643 106 ntBASIC3.37□□□□□ -1.87
SRP54P61011 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
SRP54P61011 Y_RNA.472-201ENST00000384322 102 ntBASIC3.37□□□□□ -1.87
SRP54P61011 MIR483-201ENST00000385070 76 ntBASIC3.37□□□□□ -1.87
SRP54P61011 U3.19-201ENST00000390893 196 ntBASIC3.37□□□□□ -1.87
SRP54P61011 RSL24D1P1-201ENST00000404972 493 ntBASIC3.37□□□□□ -1.87
SRP54P61011 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.37□□□□□ -1.87
SRP54P61011 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.37□□□□□ -1.87
SRP54P61011 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC3.37□□□□□ -1.87
SRP54P61011 RPL21P32-201ENST00000419877 477 ntBASIC3.37□□□□□ -1.87
SRP54P61011 AL137014.1-201ENST00000420490 1226 ntBASIC3.37□□□□□ -1.87
SRP54P61011 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.37□□□□□ -1.87
SRP54P61011 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.37□□□□□ -1.87
SRP54P61011 AL591503.2-201ENST00000442314 1005 ntBASIC3.37□□□□□ -1.87
SRP54P61011 TRGVB-201ENST00000453257 471 ntBASIC3.37□□□□□ -1.87
SRP54P61011 RPL23AP31-201ENST00000456160 467 ntBASIC3.37□□□□□ -1.87
SRP54P61011 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.37□□□□□ -1.87
SRP54P61011 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SRP54P61011 RPS27AP1-201ENST00000475545 471 ntBASIC3.37□□□□□ -1.87
SRP54P61011 AC090453.1-201ENST00000495560 436 ntBASIC3.37□□□□□ -1.87
SRP54P61011 AC026719.1-201ENST00000506059 456 ntTSL 3 BASIC3.37□□□□□ -1.87
SRP54P61011 AC113420.1-201ENST00000507903 571 ntBASIC3.37□□□□□ -1.87
SRP54P61011 AC021451.1-201ENST00000523498 1129 ntBASIC3.37□□□□□ -1.87
SRP54P61011 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
SRP54P61011 AC026333.2-201ENST00000542164 106 ntBASIC3.37□□□□□ -1.87
SRP54P61011 ZKSCAN7P1-201ENST00000543668 673 ntBASIC3.37□□□□□ -1.87
SRP54P61011 AC006518.2-202ENST00000544947 297 ntTSL 2 BASIC3.37□□□□□ -1.87
SRP54P61011 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC3.37□□□□□ -1.87
SRP54P61011 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.37□□□□□ -1.87
SRP54P61011 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.37□□□□□ -1.87
SRP54P61011 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC3.37□□□□□ -1.87
SRP54P61011 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC3.37□□□□□ -1.87
SRP54P61011 AC016877.3-201ENST00000606778 504 ntBASIC3.37□□□□□ -1.87
SRP54P61011 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.37□□□□□ -1.87
SRP54P61011 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.37□□□□□ -1.87
SRP54P61011 AC243773.3-201ENST00000613270 256 ntBASIC3.37□□□□□ -1.87
SRP54P61011 AC025588.4-201ENST00000615802 908 ntBASIC3.37□□□□□ -1.87
SRP54P61011 AC095031.1-201ENST00000623685 672 ntBASIC3.37□□□□□ -1.87
SRP54P61011 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.37□□□□□ -1.87
SRP54P61011 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.37□□□□□ -1.87
SRP54P61011 AC073073.2-201ENST00000609827 2578 ntBASIC3.37□□□□□ -1.87
SRP54P61011 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SRP54P61011 AC068647.1-201ENST00000489539 2265 ntBASIC3.36□□□□□ -1.87
SRP54P61011 MAPK10-362ENST00000641864 4484 ntBASIC3.36□□□□□ -1.87
SRP54P61011 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
SRP54P61011 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC3.36□□□□□ -1.87
SRP54P61011 RNU6-1122P-201ENST00000384449 107 ntBASIC3.36□□□□□ -1.87
SRP54P61011 AL391417.1-201ENST00000404100 426 ntBASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms