Protein–RNA interactions for Protein: P59780

AP3S2, AP-3 complex subunit sigma-2, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S2P59780 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.33□□□□□ -2.04
AP3S2P59780 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.32□□□□□ -2.04
AP3S2P59780 AC024341.1-201ENST00000526444 1552 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 MIR144-201ENST00000384886 86 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 U3.19-201ENST00000390893 196 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 RNU6ATAC-201ENST00000408749 126 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 AC009414.1-201ENST00000427200 443 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.32□□□□□ -2.04
AP3S2P59780 AL445584.1-201ENST00000431451 330 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 RPS20P5-201ENST00000434808 360 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 CR769767.1-201ENST00000436337 346 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 ARPC3P1-201ENST00000437218 533 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 RAD1P2-201ENST00000446414 663 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 AL589880.1-201ENST00000448271 287 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 AC011753.1-201ENST00000451001 220 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 PNPLA4P1-201ENST00000458328 305 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 VPS26AP1-201ENST00000483197 979 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 FO393419.2-201ENST00000492975 428 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3S2P59780 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
AP3S2P59780 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.32□□□□□ -2.04
AP3S2P59780 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3S2P59780 AC002456.2-201ENST00000509356 380 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.32□□□□□ -2.04
AP3S2P59780 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.32□□□□□ -2.04
AP3S2P59780 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.32□□□□□ -2.04
AP3S2P59780 AC124069.1-201ENST00000517454 735 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3S2P59780 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3S2P59780 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC2.32□□□□□ -2.04
AP3S2P59780 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.32□□□□□ -2.04
AP3S2P59780 KLRC2-204ENST00000536833 771 ntTSL 5 BASIC2.32□□□□□ -2.04
AP3S2P59780 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3S2P59780 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC2.32□□□□□ -2.04
AP3S2P59780 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC2.32□□□□□ -2.04
AP3S2P59780 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
AP3S2P59780 HMGB1P14-201ENST00000557424 591 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3S2P59780 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3S2P59780 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3S2P59780 AC027104.1-201ENST00000563702 681 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 MYL12BP1-201ENST00000569826 507 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 MIR3922-201ENST00000585192 84 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3S2P59780 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.32□□□□□ -2.04
AP3S2P59780 AP002826.1-201ENST00000608835 315 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 AC025016.1-201ENST00000616746 682 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 VN1R7P-201ENST00000619242 903 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.32□□□□□ -2.04
AP3S2P59780 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC2.32□□□□□ -2.04
AP3S2P59780 CRYM-AS1-204ENST00000637983 556 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 MFSD8-245ENST00000641743 948 ntBASIC2.32□□□□□ -2.04
AP3S2P59780 SMARCAD1-206ENST00000509418 2348 ntTSL 2 BASIC2.32□□□□□ -2.04
AP3S2P59780 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
AP3S2P59780 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.32□□□□□ -2.04
AP3S2P59780 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.31□□□□□ -2.04
AP3S2P59780 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.31□□□□□ -2.04
AP3S2P59780 SDAD1P2-201ENST00000441308 2028 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 AL139276.1-201ENST00000311910 1001 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 RNU6-1339P-201ENST00000363574 91 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 RNU1-85P-201ENST00000364127 164 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
AP3S2P59780 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
AP3S2P59780 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
AP3S2P59780 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.31□□□□□ -2.04
AP3S2P59780 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC2.31□□□□□ -2.04
AP3S2P59780 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.31□□□□□ -2.04
AP3S2P59780 AL365496.1-201ENST00000426885 215 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC2.31□□□□□ -2.04
AP3S2P59780 AL359073.1-201ENST00000448036 403 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 CCNB1IP1P3-201ENST00000454702 829 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 BX248409.1-201ENST00000455497 255 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 AC133134.1-201ENST00000466800 359 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC2.31□□□□□ -2.04
AP3S2P59780 RPS27P23-201ENST00000487608 251 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 RPS27P27-201ENST00000498779 255 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC2.31□□□□□ -2.04
AP3S2P59780 MTCO1P31-201ENST00000506355 492 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 RNA5SP402-201ENST00000517148 110 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
AP3S2P59780 AC123904.3-201ENST00000547218 814 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC2.31□□□□□ -2.04
AP3S2P59780 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC2.31□□□□□ -2.04
AP3S2P59780 AL035071.2-201ENST00000565572 459 ntTSL 3 BASIC2.31□□□□□ -2.04
AP3S2P59780 MIR4658-201ENST00000584344 65 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.31□□□□□ -2.04
AP3S2P59780 AC104237.2-201ENST00000612456 443 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 AC004852.3-201ENST00000614131 326 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 MIR6758-201ENST00000620653 63 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
AP3S2P59780 AP006248.3-201ENST00000623580 594 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC2.31□□□□□ -2.04
AP3S2P59780 TPTE2P4-201ENST00000258589 1605 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.31□□□□□ -2.04
AP3S2P59780 CR848007.1-201ENST00000442354 1699 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 AL355596.1-201ENST00000565399 3996 ntBASIC2.31□□□□□ -2.04
AP3S2P59780 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
AP3S2P59780 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC2.3□□□□□ -2.04
AP3S2P59780 MIR649-201ENST00000384843 97 ntBASIC2.3□□□□□ -2.04
AP3S2P59780 SNORA11C-201ENST00000408532 129 ntBASIC2.3□□□□□ -2.04
AP3S2P59780 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC2.3□□□□□ -2.04
AP3S2P59780 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms