Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CLRN1P58418 HSPE1P11-201ENST00000339579 310 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 MIR454-201ENST00000390180 115 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
CLRN1P58418 RNU6-821P-201ENST00000390995 107 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 U3.30-201ENST00000391308 210 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 RPL32P23-201ENST00000397237 405 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 AL592291.1-201ENST00000403830 352 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 AL356432.1-201ENST00000405809 419 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 RNU6-516P-201ENST00000411381 104 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 AC092447.6-201ENST00000414578 210 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 COX6B1P1-201ENST00000415962 213 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 OR2AM1P-201ENST00000422137 422 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 AC005517.2-201ENST00000424673 553 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 RPL35AP12-201ENST00000425362 338 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 OR2AS1P-201ENST00000427827 319 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 MED13P1-201ENST00000428342 171 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.24□□□□□ -1.73
CLRN1P58418 RPL34P6-201ENST00000432390 345 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 LYPLA1P1-201ENST00000434514 622 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 TAAR7P-201ENST00000436141 242 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.24□□□□□ -1.73
CLRN1P58418 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.24□□□□□ -1.73
CLRN1P58418 RPL7P12-201ENST00000446719 750 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 OR1H1P-201ENST00000448731 937 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 AURKAPS2-201ENST00000454983 333 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 AC126389.1-201ENST00000477436 290 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC4.24□□□□□ -1.73
CLRN1P58418 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC4.24□□□□□ -1.73
CLRN1P58418 IGKV1OR2-1-201ENST00000514060 354 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 AC105417.1-201ENST00000514691 285 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 RNU2-10P-201ENST00000516375 211 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 RNU7-51P-201ENST00000516560 62 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 AC008033.2-201ENST00000542626 177 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.24□□□□□ -1.73
CLRN1P58418 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC4.24□□□□□ -1.73
CLRN1P58418 AC044860.2-201ENST00000561005 179 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.24□□□□□ -1.73
CLRN1P58418 LINC01909-202ENST00000584919 815 ntTSL 3 BASIC4.24□□□□□ -1.73
CLRN1P58418 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.24□□□□□ -1.73
CLRN1P58418 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.24□□□□□ -1.73
CLRN1P58418 AP001429.1-201ENST00000602568 530 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 IGKV1OR2-118-201ENST00000603238 347 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC4.24□□□□□ -1.73
CLRN1P58418 AC068870.2-201ENST00000620635 389 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 AC090617.10-201ENST00000624308 134 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 AP000843.1-201ENST00000624880 701 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC4.24□□□□□ -1.73
CLRN1P58418 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLRN1P58418 AC092821.1-201ENST00000640129 4180 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
CLRN1P58418 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.24□□□□□ -1.73
CLRN1P58418 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLRN1P58418 IRF5P1-201ENST00000504852 2164 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLRN1P58418 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLRN1P58418 DHX9P1-201ENST00000436565 3076 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 MAPK10-303ENST00000641324 3959 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 SALL4P2-201ENST00000423288 2910 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
CLRN1P58418 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 AC027287.1-201ENST00000553115 1453 ntBASIC4.24□□□□□ -1.73
CLRN1P58418 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
CLRN1P58418 ASNSP3-201ENST00000451989 1306 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC4.23□□□□□ -1.73
CLRN1P58418 AC090971.4-201ENST00000560291 1800 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 AL157700.1-201ENST00000561973 1432 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.23□□□□□ -1.73
CLRN1P58418 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
CLRN1P58418 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
CLRN1P58418 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
CLRN1P58418 RN7SKP104-201ENST00000362605 328 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 Y_RNA.166-201ENST00000363730 102 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 RN7SKP224-201ENST00000364140 325 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 MIR105-2-201ENST00000385083 81 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 RNU1-82P-201ENST00000390851 165 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 GLULP6-201ENST00000399502 913 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 AL645733.1-201ENST00000402250 217 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 RNA5SP56-201ENST00000410277 118 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 EEF1A1P40-201ENST00000412883 573 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC4.23□□□□□ -1.73
CLRN1P58418 AL391219.1-201ENST00000422570 483 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 SRIP2-201ENST00000428470 166 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 RPS5P7-201ENST00000456664 608 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC4.23□□□□□ -1.73
CLRN1P58418 AC004453.1-201ENST00000487895 408 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 AC135721.1-201ENST00000497954 479 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC4.23□□□□□ -1.73
CLRN1P58418 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
CLRN1P58418 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.23□□□□□ -1.73
CLRN1P58418 AC026427.2-201ENST00000506228 536 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 FGF7P4-201ENST00000509595 295 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC4.23□□□□□ -1.73
CLRN1P58418 RNU6-64P-201ENST00000517119 105 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 SUMO2P20-201ENST00000520803 283 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC4.23□□□□□ -1.73
CLRN1P58418 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC4.23□□□□□ -1.73
CLRN1P58418 AC022690.1-201ENST00000526681 550 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 AC021006.3-201ENST00000530771 192 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 CR383656.7-201ENST00000548164 174 ntBASIC4.23□□□□□ -1.73
CLRN1P58418 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms