Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 AC068944.2-201ENST00000610373 403 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 AC090517.2-201ENST00000614966 680 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 AL136313.1-201ENST00000624804 202 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 AL157786.1-207ENST00000627771 695 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 PSMD6-202ENST00000394431 1349 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SUMO3P55854 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.14□□□□□ -1.75
SUMO3P55854 SEC31A-237ENST00000513858 3687 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SUMO3P55854 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.13□□□□□ -1.75
SUMO3P55854 ABCA8-215ENST00000615593 3264 ntTSL 5 BASIC4.13□□□□□ -1.75
SUMO3P55854 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC4.13□□□□□ -1.75
SUMO3P55854 CR848007.1-201ENST00000442354 1699 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 EOGT-210ENST00000615922 1931 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.13□□□□□ -1.75
SUMO3P55854 OR56B2P-202ENST00000641377 2453 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 RPS6KA5-207ENST00000614987 26795 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SUMO3P55854 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SUMO3P55854 SGIP1-204ENST00000371039 4080 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SUMO3P55854 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SUMO3P55854 RNU6-511P-201ENST00000363496 107 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 SNORA7.2-201ENST00000364446 145 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 Y_RNA.554-201ENST00000384672 102 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 CALM2P3-201ENST00000400429 449 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 RPS4XP9-201ENST00000405151 780 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 RPS16P5-201ENST00000406501 404 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 AL136369.2-201ENST00000420825 537 ntTSL 3 BASIC4.13□□□□□ -1.75
SUMO3P55854 UQCRBP1-201ENST00000421129 336 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 AC069157.1-201ENST00000421749 137 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 MTCO2P19-201ENST00000427513 598 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 GPR143P-201ENST00000434155 205 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC4.13□□□□□ -1.75
SUMO3P55854 AC140076.1-201ENST00000449897 361 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 RPS11P1-201ENST00000451072 473 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC4.13□□□□□ -1.75
SUMO3P55854 RN7SL346P-201ENST00000491561 294 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 AC079382.1-201ENST00000493346 557 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 AC078918.1-201ENST00000498515 228 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 AC019235.1-201ENST00000503847 207 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 MLLT10P2-201ENST00000506434 249 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 AC093297.2-204ENST00000508945 295 ntTSL 3 BASIC4.13□□□□□ -1.75
SUMO3P55854 AC009646.1-201ENST00000510455 318 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.13□□□□□ -1.75
SUMO3P55854 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.13□□□□□ -1.75
SUMO3P55854 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.13□□□□□ -1.75
SUMO3P55854 RNA5SP446-201ENST00000515955 82 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.13□□□□□ -1.75
SUMO3P55854 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC4.13□□□□□ -1.75
SUMO3P55854 AC109635.4-202ENST00000531666 412 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC4.13□□□□□ -1.75
SUMO3P55854 AC123904.3-201ENST00000547218 814 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 SUB1P2-201ENST00000556401 297 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 ATP5J2P6-201ENST00000565203 266 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 AC092326.1-201ENST00000567465 674 ntTSL 3 BASIC4.13□□□□□ -1.75
SUMO3P55854 AC069061.3-201ENST00000582254 823 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 MIR4293-201ENST00000584305 78 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SUMO3P55854 RPL26P30-202ENST00000602923 645 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 AL391646.1-201ENST00000603860 190 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 RBM11P1-201ENST00000604951 799 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 AL136363.1-201ENST00000605349 337 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.13□□□□□ -1.75
SUMO3P55854 AC092954.2-201ENST00000609103 430 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 AC024941.1-201ENST00000612250 334 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC4.13□□□□□ -1.75
SUMO3P55854 AL445584.2-201ENST00000614030 616 ntTSL 5 BASIC4.13□□□□□ -1.75
SUMO3P55854 AC091905.2-201ENST00000623143 306 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 AC009161.2-201ENST00000624626 138 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 AC105074.1-201ENST00000623380 3095 ntBASIC4.13□□□□□ -1.75
SUMO3P55854 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SUMO3P55854 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SUMO3P55854 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SUMO3P55854 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SUMO3P55854 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SUMO3P55854 QSER1-201ENST00000399302 9335 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SUMO3P55854 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC4.13□□□□□ -1.75
SUMO3P55854 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC4.13□□□□□ -1.75
SUMO3P55854 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SUMO3P55854 APC-207ENST00000508376 10619 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SUMO3P55854 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SUMO3P55854 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.12□□□□□ -1.75
SUMO3P55854 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC4.12□□□□□ -1.75
SUMO3P55854 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.12□□□□□ -1.75
SUMO3P55854 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SUMO3P55854 GABRG2-210ENST00000638772 7669 ntTSL 5 BASIC4.12□□□□□ -1.75
SUMO3P55854 ELAVL2-202ENST00000380110 3691 ntTSL 5 BASIC4.12□□□□□ -1.75
SUMO3P55854 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC4.12□□□□□ -1.75
SUMO3P55854 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.12□□□□□ -1.75
SUMO3P55854 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.12□□□□□ -1.75
SUMO3P55854 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SUMO3P55854 AL158064.1-201ENST00000627044 2242 ntTSL 4 BASIC4.12□□□□□ -1.75
SUMO3P55854 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SUMO3P55854 HSPE1P11-201ENST00000339579 310 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 RNU6-1284P-201ENST00000363701 100 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 RNU6-456P-201ENST00000384493 107 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SUMO3P55854 RPL21P24-201ENST00000413752 448 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 DUTP6-201ENST00000425573 462 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 RPL21P112-201ENST00000434403 463 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 AL662791.1-201ENST00000441992 928 ntBASIC4.12□□□□□ -1.75
SUMO3P55854 AC096558.1-202ENST00000442794 561 ntTSL 4 BASIC4.12□□□□□ -1.75
SUMO3P55854 MTCO3P45-201ENST00000443036 613 ntBASIC4.12□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 86.8 ms