Protein–RNA interactions for Protein: P55771

PAX9, Paired box protein Pax-9, humanhuman

Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX9P55771 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
PAX9P55771 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.19□□□□□ -1.9
PAX9P55771 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC3.19□□□□□ -1.9
PAX9P55771 AC010733.2-201ENST00000589496 5702 ntBASIC3.18□□□□□ -1.9
PAX9P55771 MAPK10-373ENST00000641983 6772 ntBASIC3.18□□□□□ -1.9
PAX9P55771 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PAX9P55771 AC005550.3-201ENST00000451240 3743 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PAX9P55771 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PAX9P55771 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.18□□□□□ -1.9
PAX9P55771 C12orf60-201ENST00000330828 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PAX9P55771 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PAX9P55771 AP002001.2-201ENST00000529025 1469 ntBASIC3.18□□□□□ -1.9
PAX9P55771 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
PAX9P55771 Y_RNA.194-201ENST00000363985 102 ntBASIC3.18□□□□□ -1.9
PAX9P55771 RNU4-75P-201ENST00000364621 146 ntBASIC3.18□□□□□ -1.9
PAX9P55771 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.18□□□□□ -1.9
PAX9P55771 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.18□□□□□ -1.9
PAX9P55771 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
PAX9P55771 AL356421.1-201ENST00000403255 413 ntBASIC3.18□□□□□ -1.9
PAX9P55771 AC009237.5-201ENST00000414271 501 ntBASIC3.18□□□□□ -1.9
PAX9P55771 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PAX9P55771 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.18□□□□□ -1.9
PAX9P55771 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC3.18□□□□□ -1.9
PAX9P55771 AL031667.1-201ENST00000440222 725 ntBASIC3.18□□□□□ -1.9
PAX9P55771 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC3.18□□□□□ -1.9
PAX9P55771 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC3.18□□□□□ -1.9
PAX9P55771 SBDSP1-204ENST00000453858 737 ntBASIC3.18□□□□□ -1.9
PAX9P55771 DNAJC19P1-201ENST00000455312 319 ntBASIC3.18□□□□□ -1.9
PAX9P55771 snoU13.1-201ENST00000459157 104 ntBASIC3.18□□□□□ -1.9
PAX9P55771 GPX5-203ENST00000469384 428 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PAX9P55771 RN7SL738P-201ENST00000470264 297 ntBASIC3.18□□□□□ -1.9
PAX9P55771 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.18□□□□□ -1.9
PAX9P55771 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC3.18□□□□□ -1.9
PAX9P55771 AC006390.1-201ENST00000508068 283 ntBASIC3.18□□□□□ -1.9
PAX9P55771 AC079140.3-201ENST00000511111 550 ntBASIC3.18□□□□□ -1.9
PAX9P55771 AC099522.1-202ENST00000514718 367 ntBASIC3.18□□□□□ -1.9
PAX9P55771 AP003497.1-201ENST00000528472 562 ntBASIC3.18□□□□□ -1.9
PAX9P55771 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.18□□□□□ -1.9
PAX9P55771 AP000873.5-201ENST00000533906 236 ntBASIC3.18□□□□□ -1.9
PAX9P55771 OR6C73P-201ENST00000546432 358 ntBASIC3.18□□□□□ -1.9
PAX9P55771 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC3.18□□□□□ -1.9
PAX9P55771 SETP7-201ENST00000552169 453 ntBASIC3.18□□□□□ -1.9
PAX9P55771 AL121576.1-201ENST00000556055 276 ntBASIC3.18□□□□□ -1.9
PAX9P55771 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.18□□□□□ -1.9
PAX9P55771 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC3.18□□□□□ -1.9
PAX9P55771 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.18□□□□□ -1.9
PAX9P55771 AC012669.1-201ENST00000603209 283 ntBASIC3.18□□□□□ -1.9
PAX9P55771 AC087752.4-201ENST00000605911 462 ntBASIC3.18□□□□□ -1.9
PAX9P55771 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.18□□□□□ -1.9
PAX9P55771 AC103591.3-201ENST00000608684 209 ntBASIC3.18□□□□□ -1.9
PAX9P55771 AC092683.2-203ENST00000618807 788 ntTSL 5 BASIC3.18□□□□□ -1.9
PAX9P55771 AC091905.1-201ENST00000624400 311 ntBASIC3.18□□□□□ -1.9
PAX9P55771 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC3.18□□□□□ -1.9
PAX9P55771 CRYM-AS1-204ENST00000637983 556 ntBASIC3.18□□□□□ -1.9
PAX9P55771 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PAX9P55771 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
PAX9P55771 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.18□□□□□ -1.9
PAX9P55771 AF127577.6-201ENST00000623352 2191 ntBASIC3.18□□□□□ -1.9
PAX9P55771 RAD17-202ENST00000305138 3164 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PAX9P55771 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
PAX9P55771 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.18□□□□□ -1.9
PAX9P55771 TNPO1P3-201ENST00000436471 2662 ntBASIC3.17□□□□□ -1.9
PAX9P55771 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PAX9P55771 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PAX9P55771 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
PAX9P55771 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
PAX9P55771 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.17□□□□□ -1.9
PAX9P55771 RNU4-91P-201ENST00000364778 135 ntBASIC3.17□□□□□ -1.9
PAX9P55771 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC3.17□□□□□ -1.9
PAX9P55771 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PAX9P55771 SNORA75-201ENST00000384158 137 ntBASIC3.17□□□□□ -1.9
PAX9P55771 DEFB108C-201ENST00000400154 252 ntBASIC3.17□□□□□ -1.9
PAX9P55771 RNU2-47P-201ENST00000410649 186 ntBASIC3.17□□□□□ -1.9
PAX9P55771 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.17□□□□□ -1.9
PAX9P55771 AC092484.1-201ENST00000420548 833 ntTSL 5 BASIC3.17□□□□□ -1.9
PAX9P55771 OR8F1P-201ENST00000425243 930 ntBASIC3.17□□□□□ -1.9
PAX9P55771 AL356583.2-201ENST00000426536 280 ntBASIC3.17□□□□□ -1.9
PAX9P55771 AL080248.1-201ENST00000428954 388 ntTSL 3 BASIC3.17□□□□□ -1.9
PAX9P55771 AC131571.1-201ENST00000429821 577 ntTSL 5 BASIC3.17□□□□□ -1.9
PAX9P55771 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.17□□□□□ -1.9
PAX9P55771 RPS29P17-201ENST00000430795 166 ntBASIC3.17□□□□□ -1.9
PAX9P55771 CYCSP43-201ENST00000438233 310 ntBASIC3.17□□□□□ -1.9
PAX9P55771 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC3.17□□□□□ -1.9
PAX9P55771 RPS4XP4-201ENST00000443195 763 ntBASIC3.17□□□□□ -1.9
PAX9P55771 AC239367.2-201ENST00000447309 705 ntBASIC3.17□□□□□ -1.9
PAX9P55771 AC005871.1-201ENST00000450247 475 ntTSL 3 BASIC3.17□□□□□ -1.9
PAX9P55771 AC104308.1-201ENST00000454621 333 ntBASIC3.17□□□□□ -1.9
PAX9P55771 LINC01546-201ENST00000457435 674 ntTSL 2 BASIC3.17□□□□□ -1.9
PAX9P55771 RPL23AP24-201ENST00000458203 385 ntBASIC3.17□□□□□ -1.9
PAX9P55771 snoU13.8-201ENST00000458890 104 ntBASIC3.17□□□□□ -1.9
PAX9P55771 RN7SL330P-201ENST00000469709 307 ntBASIC3.17□□□□□ -1.9
PAX9P55771 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
PAX9P55771 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.17□□□□□ -1.9
PAX9P55771 TRBV12-2-201ENST00000489763 344 ntBASIC3.17□□□□□ -1.9
PAX9P55771 AC034222.1-201ENST00000494052 532 ntBASIC3.17□□□□□ -1.9
PAX9P55771 UBE2CP3-201ENST00000502715 450 ntBASIC3.17□□□□□ -1.9
PAX9P55771 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.17□□□□□ -1.9
PAX9P55771 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.17□□□□□ -1.9
PAX9P55771 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.17□□□□□ -1.9
PAX9P55771 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 112.3 ms