Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 RNY3P3-201ENST00000363816 102 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 SNORD66.1-201ENST00000391230 76 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 SNORA75.4-201ENST00000391278 119 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AL122016.1-201ENST00000403365 367 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AL078604.1-201ENST00000404609 466 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 SF3B1-202ENST00000409915 600 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXG1P55316 RNA5SP36-201ENST00000410197 133 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 RPL23AP26-201ENST00000412728 464 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXG1P55316 AC079163.1-201ENST00000418416 407 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXG1P55316 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXG1P55316 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXG1P55316 SNRPEP10-201ENST00000420249 274 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXG1P55316 AC009965.2-201ENST00000425328 970 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AL589872.1-201ENST00000426602 288 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 RPL7P4-203ENST00000430239 730 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
FOXG1P55316 LANCL1-AS1-203ENST00000433296 864 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXG1P55316 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXG1P55316 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXG1P55316 AC004485.1-201ENST00000439839 527 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXG1P55316 RPL23AP16-201ENST00000441715 421 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 CALM1P1-201ENST00000442082 433 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXG1P55316 AC010235.1-201ENST00000450613 547 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXG1P55316 AC233279.1-201ENST00000455300 423 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 NF1P3-201ENST00000457709 450 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AC010618.1-201ENST00000469924 477 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.8□□□□□ -1.8
FOXG1P55316 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXG1P55316 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AC006390.1-201ENST00000508068 283 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.8□□□□□ -1.8
FOXG1P55316 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXG1P55316 Y_RNA.672-201ENST00000516289 104 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 RNA5SP49-201ENST00000516450 115 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 RNU6-445P-201ENST00000516949 107 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 HSPA8P13-201ENST00000523715 472 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 OR5M1-201ENST00000526538 948 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
FOXG1P55316 AP003034.1-201ENST00000534621 422 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AC037471.2-201ENST00000564941 598 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 ATP5J2P6-201ENST00000565203 266 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXG1P55316 AC243960.4-201ENST00000600532 288 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AC245014.2-201ENST00000603689 287 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AC007621.1-201ENST00000604544 437 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AL590392.1-201ENST00000604960 446 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AC246785.4-201ENST00000605374 287 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AC091979.2-201ENST00000607514 214 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXG1P55316 AC068722.2-201ENST00000618734 544 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 CR392039.4-201ENST00000624968 501 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXG1P55316 AC140479.6-201ENST00000633535 357 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC3.8□□□□□ -1.8
FOXG1P55316 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC3.8□□□□□ -1.8
FOXG1P55316 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
FOXG1P55316 ASNSP1-204ENST00000641977 1664 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 LINC01197-202ENST00000555332 3568 ntTSL 3 BASIC3.8□□□□□ -1.8
FOXG1P55316 AL133243.3-201ENST00000617415 3004 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 MTCO1P9-201ENST00000505577 1534 ntBASIC3.8□□□□□ -1.8
FOXG1P55316 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
FOXG1P55316 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.8□□□□□ -1.8
FOXG1P55316 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXG1P55316 AC018529.3-201ENST00000624212 2254 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXG1P55316 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.79□□□□□ -1.8
FOXG1P55316 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FOXG1P55316 AC139713.2-215ENST00000641428 5037 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FOXG1P55316 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
FOXG1P55316 GNG5P1-201ENST00000255500 204 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 OR11H4-201ENST00000315409 1082 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 RNU1-20P-201ENST00000363314 162 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 RNA5SP175-201ENST00000364275 119 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXG1P55316 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
FOXG1P55316 AL121834.1-202ENST00000404494 277 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 RN7SKP235-201ENST00000410662 305 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXG1P55316 OR9R1P-201ENST00000412200 877 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 AC004987.3-201ENST00000413879 771 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 AL353678.1-201ENST00000422735 741 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 AL157831.1-201ENST00000426134 473 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 AL035410.1-201ENST00000427409 427 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXG1P55316 AC091390.1-201ENST00000433904 331 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 AC023347.2-201ENST00000433994 462 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.79□□□□□ -1.8
FOXG1P55316 MTCO1P27-201ENST00000448269 226 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXG1P55316 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXG1P55316 LINC01768-201ENST00000453347 476 ntTSL 3 BASIC3.79□□□□□ -1.8
FOXG1P55316 AC133473.1-201ENST00000455173 299 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 MTND1P12-201ENST00000455231 147 ntBASIC3.79□□□□□ -1.8
FOXG1P55316 AC092620.2-201ENST00000458007 744 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXG1P55316 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.79□□□□□ -1.8
FOXG1P55316 DEFB109F-201ENST00000491870 277 ntBASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms