Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
CDH4P55283 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.11□□□□□ -1.91
CDH4P55283 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDH4P55283 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH4P55283 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH4P55283 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH4P55283 RPL23AP57-201ENST00000332361 466 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AC073325.2-201ENST00000339545 159 ntBASIC3.11□□□□□ -1.91
CDH4P55283 OR5H2-201ENST00000355273 945 ntBASIC3.11□□□□□ -1.91
CDH4P55283 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
CDH4P55283 RNU5B-1-201ENST00000363286 116 ntBASIC3.11□□□□□ -1.91
CDH4P55283 RNU1-140P-201ENST00000365040 165 ntBASIC3.11□□□□□ -1.91
CDH4P55283 SNORA48.2-201ENST00000390926 124 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AC016769.3-201ENST00000396562 315 ntBASIC3.11□□□□□ -1.91
CDH4P55283 ERMN-204ENST00000409925 556 ntTSL 4 BASIC3.11□□□□□ -1.91
CDH4P55283 RNU2-72P-201ENST00000411175 163 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH4P55283 BOLA3P4-201ENST00000418151 400 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AC099677.1-201ENST00000420575 175 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH4P55283 MTCO1P48-201ENST00000448024 1096 ntBASIC3.11□□□□□ -1.91
CDH4P55283 RSL24D1P3-201ENST00000449255 495 ntBASIC3.11□□□□□ -1.91
CDH4P55283 RPS17P11-201ENST00000474297 293 ntBASIC3.11□□□□□ -1.91
CDH4P55283 GAPDHP39-201ENST00000481866 979 ntBASIC3.11□□□□□ -1.91
CDH4P55283 RN7SL20P-201ENST00000488827 297 ntBASIC3.11□□□□□ -1.91
CDH4P55283 PDC-202ENST00000497198 1174 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDH4P55283 OR2A20P-203ENST00000498397 1268 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AC006390.1-201ENST00000508068 283 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.11□□□□□ -1.91
CDH4P55283 RNU6-711P-201ENST00000517255 106 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH4P55283 AC009812.2-201ENST00000517657 457 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.11□□□□□ -1.91
CDH4P55283 AC022690.1-201ENST00000526681 550 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDH4P55283 CYB5AP5-201ENST00000549779 389 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AC034268.2-201ENST00000571784 482 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AC090666.1-201ENST00000578241 445 ntBASIC3.11□□□□□ -1.91
CDH4P55283 FAM60BP-201ENST00000578364 658 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH4P55283 AC090330.1-201ENST00000588646 764 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AC092954.1-201ENST00000609121 445 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AP005137.2-201ENST00000609238 400 ntBASIC3.11□□□□□ -1.91
CDH4P55283 NPPA-AS1_3.1-201ENST00000617059 108 ntBASIC3.11□□□□□ -1.91
CDH4P55283 AC091925.2-201ENST00000625059 256 ntBASIC3.11□□□□□ -1.91
CDH4P55283 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH4P55283 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH4P55283 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH4P55283 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
CDH4P55283 GDI2P1-201ENST00000429312 1336 ntBASIC3.11□□□□□ -1.91
CDH4P55283 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.11□□□□□ -1.91
CDH4P55283 ZNF833P-201ENST00000424938 1494 ntBASIC3.1□□□□□ -1.91
CDH4P55283 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH4P55283 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
CDH4P55283 AL035425.3-201ENST00000564206 4996 ntBASIC3.1□□□□□ -1.91
CDH4P55283 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.1□□□□□ -1.91
CDH4P55283 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDH4P55283 MIR128-1-201ENST00000384921 82 ntBASIC3.1□□□□□ -1.91
CDH4P55283 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.1□□□□□ -1.91
CDH4P55283 NDUFB4P5-201ENST00000415445 361 ntBASIC3.1□□□□□ -1.91
CDH4P55283 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
CDH4P55283 AC092634.6-201ENST00000418558 192 ntBASIC3.1□□□□□ -1.91
CDH4P55283 MTCO3P1-205ENST00000422088 832 ntBASIC3.1□□□□□ -1.91
CDH4P55283 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH4P55283 MTND4LP10-201ENST00000435146 291 ntBASIC3.1□□□□□ -1.91
CDH4P55283 RPL23AP22-201ENST00000437556 453 ntBASIC3.1□□□□□ -1.91
CDH4P55283 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH4P55283 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH4P55283 AC015908.1-201ENST00000478739 476 ntBASIC3.1□□□□□ -1.91
CDH4P55283 RPS29P2-201ENST00000479278 136 ntBASIC3.1□□□□□ -1.91
CDH4P55283 AC108860.1-201ENST00000484521 383 ntBASIC3.1□□□□□ -1.91
CDH4P55283 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.1□□□□□ -1.91
CDH4P55283 AC097521.1-201ENST00000505488 567 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH4P55283 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH4P55283 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH4P55283 SNORA48.10-201ENST00000516965 160 ntBASIC3.1□□□□□ -1.91
CDH4P55283 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.1□□□□□ -1.91
CDH4P55283 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.1□□□□□ -1.91
CDH4P55283 AC109466.1-214ENST00000522762 583 ntTSL 2 BASIC3.1□□□□□ -1.91
CDH4P55283 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH4P55283 BDH2P1-201ENST00000602288 736 ntBASIC3.1□□□□□ -1.91
CDH4P55283 VN1R7P-201ENST00000619242 903 ntBASIC3.1□□□□□ -1.91
CDH4P55283 AC093875.1-201ENST00000623688 504 ntBASIC3.1□□□□□ -1.91
CDH4P55283 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH4P55283 SATB1-AS1-266ENST00000630271 813 ntTSL 5 BASIC3.1□□□□□ -1.91
CDH4P55283 ZNF807-201ENST00000328088 1707 ntBASIC3.1□□□□□ -1.91
CDH4P55283 AC000403.1-201ENST00000613696 3585 ntBASIC3.1□□□□□ -1.91
CDH4P55283 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
CDH4P55283 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH4P55283 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
CDH4P55283 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
CDH4P55283 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
CDH4P55283 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC3.09□□□□□ -1.91
CDH4P55283 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.09□□□□□ -1.91
CDH4P55283 Y_RNA.110-201ENST00000363220 99 ntBASIC3.09□□□□□ -1.91
CDH4P55283 U3.6-201ENST00000363622 211 ntBASIC3.09□□□□□ -1.91
CDH4P55283 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC3.09□□□□□ -1.91
CDH4P55283 MCTS2P-201ENST00000394552 546 ntBASIC3.09□□□□□ -1.91
CDH4P55283 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.09□□□□□ -1.91
CDH4P55283 RNA5SP274-201ENST00000410484 108 ntBASIC3.09□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 88.1 ms