Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LIMK1P53667 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.73□□□□□ -1.81
LIMK1P53667 AC092673.1-201ENST00000510203 428 ntTSL 3 BASIC3.73□□□□□ -1.81
LIMK1P53667 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.73□□□□□ -1.81
LIMK1P53667 AC010342.1-201ENST00000514047 877 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 AC104986.1-201ENST00000517978 436 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.73□□□□□ -1.81
LIMK1P53667 MTCO2P15-201ENST00000532655 656 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 AP003086.2-201ENST00000534168 437 ntTSL 3 BASIC3.73□□□□□ -1.81
LIMK1P53667 CCDC7-207ENST00000535327 700 ntAPPRIS ALT2 TSL 1 (best) BASIC3.73□□□□□ -1.81
LIMK1P53667 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC3.73□□□□□ -1.81
LIMK1P53667 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC3.73□□□□□ -1.81
LIMK1P53667 HSPE1P3-201ENST00000559254 309 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC3.73□□□□□ -1.81
LIMK1P53667 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.73□□□□□ -1.81
LIMK1P53667 AC022022.2-201ENST00000602989 360 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 AC025588.2-201ENST00000604851 466 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 AC011330.2-201ENST00000621680 635 ntBASIC3.73□□□□□ -1.81
LIMK1P53667 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC3.73□□□□□ -1.81
LIMK1P53667 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.73□□□□□ -1.81
LIMK1P53667 AC245427.9-201ENST00000633713 53 ntAPPRIS P1 BASIC3.73□□□□□ -1.81
LIMK1P53667 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LIMK1P53667 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.73□□□□□ -1.81
LIMK1P53667 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.73□□□□□ -1.81
LIMK1P53667 MAPK10-373ENST00000641983 6772 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 NCAPGP1-201ENST00000505112 1814 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AP000776.1-201ENST00000530032 1663 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AC118273.1-201ENST00000525324 3006 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
LIMK1P53667 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.72□□□□□ -1.81
LIMK1P53667 AL079343.1-201ENST00000572358 1771 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LIMK1P53667 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LIMK1P53667 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LIMK1P53667 FAM133CP-201ENST00000332869 704 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LIMK1P53667 U3.19-201ENST00000390893 196 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 CLK1-203ENST00000409769 1192 ntTSL 2 BASIC3.72□□□□□ -1.81
LIMK1P53667 USP9YP33-201ENST00000412220 421 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.72□□□□□ -1.81
LIMK1P53667 RPL7AP73-201ENST00000413490 353 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AC005326.1-201ENST00000429197 123 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.72□□□□□ -1.81
LIMK1P53667 AL365396.1-201ENST00000430854 671 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.72□□□□□ -1.81
LIMK1P53667 USP9YP35-201ENST00000435696 412 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.72□□□□□ -1.81
LIMK1P53667 AL591503.2-201ENST00000442314 1005 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 HSPE1P28-201ENST00000443139 211 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 RPL17P49-201ENST00000443728 411 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 TMEM251P1-201ENST00000503717 318 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AC093281.2-201ENST00000510153 597 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC3.72□□□□□ -1.81
LIMK1P53667 RNU6-27P-201ENST00000516146 107 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AC022861.1-201ENST00000522981 663 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.72□□□□□ -1.81
LIMK1P53667 AC009097.3-201ENST00000563557 1018 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC3.72□□□□□ -1.81
LIMK1P53667 MIR5186-201ENST00000577504 120 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 VN1R82P-201ENST00000601481 356 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AC010591.1-201ENST00000603941 649 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AL137843.1-201ENST00000605078 385 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AC080013.4-201ENST00000607624 649 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AC063944.3-201ENST00000609969 533 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AC092106.3-201ENST00000611308 722 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 AL590240.3-201ENST00000621416 943 ntBASIC3.72□□□□□ -1.81
LIMK1P53667 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.72□□□□□ -1.81
LIMK1P53667 ZBTB37-201ENST00000367701 19128 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
LIMK1P53667 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
LIMK1P53667 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC3.72□□□□□ -1.81
LIMK1P53667 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
LIMK1P53667 RPS4XP5-202ENST00000449995 1334 ntBASIC3.71□□□□□ -1.81
LIMK1P53667 PHF20L1-210ENST00000395390 5900 ntTSL 5 BASIC3.71□□□□□ -1.81
LIMK1P53667 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
LIMK1P53667 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.71□□□□□ -1.82
LIMK1P53667 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LIMK1P53667 RNF111-206ENST00000559209 5278 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
LIMK1P53667 GNG5P1-201ENST00000255500 204 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 AP000568.1-201ENST00000282964 442 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.71□□□□□ -1.82
LIMK1P53667 SNORA48.5-201ENST00000391143 135 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 RNU6-757P-201ENST00000410334 100 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 PGBD4P8-201ENST00000412993 562 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 RPL30P2-201ENST00000414021 291 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 RPS24P7-201ENST00000416921 246 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 RPL22P18-201ENST00000417197 377 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 AC019178.2-201ENST00000423595 505 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 AC087650.1-201ENST00000431445 468 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 ZMYM4-AS1-201ENST00000432683 459 ntTSL 2 BASIC3.71□□□□□ -1.82
LIMK1P53667 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC3.71□□□□□ -1.82
LIMK1P53667 RPS25P9-201ENST00000435591 252 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 AC005019.1-201ENST00000436455 431 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 HIGD1AP11-201ENST00000438361 280 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 AC005297.2-201ENST00000450430 606 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 RPL26P28-201ENST00000451325 435 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 ZNF736P8Y-201ENST00000451913 669 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 USP9YP34-201ENST00000453983 808 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.71□□□□□ -1.82
LIMK1P53667 RPS23P3-201ENST00000470993 430 ntBASIC3.71□□□□□ -1.82
LIMK1P53667 AC034244.1-201ENST00000507687 207 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 80.4 ms