Protein–RNA interactions for Protein: P49662

CASP4, Caspase-4, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4P49662 AC093156.1-201ENST00000440382 670 ntBASIC3.19□□□□□ -1.9
CASP4P49662 MTCO1P48-201ENST00000448024 1096 ntBASIC3.19□□□□□ -1.9
CASP4P49662 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.19□□□□□ -1.9
CASP4P49662 KLRA1P-201ENST00000503499 986 ntBASIC3.19□□□□□ -1.9
CASP4P49662 AC093767.1-201ENST00000504523 156 ntBASIC3.19□□□□□ -1.9
CASP4P49662 AC004062.1-201ENST00000509926 645 ntBASIC3.19□□□□□ -1.9
CASP4P49662 LEF1-218ENST00000512172 598 ntTSL 2 BASIC3.19□□□□□ -1.9
CASP4P49662 AC097467.3-212ENST00000512269 568 ntTSL 3 BASIC3.19□□□□□ -1.9
CASP4P49662 snoZ278.1-201ENST00000517059 112 ntBASIC3.19□□□□□ -1.9
CASP4P49662 AC023632.1-201ENST00000518463 375 ntBASIC3.19□□□□□ -1.9
CASP4P49662 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.19□□□□□ -1.9
CASP4P49662 AC092451.2-201ENST00000538746 658 ntBASIC3.19□□□□□ -1.9
CASP4P49662 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.19□□□□□ -1.9
CASP4P49662 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.19□□□□□ -1.9
CASP4P49662 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3.19□□□□□ -1.9
CASP4P49662 MIR4325-201ENST00000583049 90 ntBASIC3.19□□□□□ -1.9
CASP4P49662 BNIP3P22-201ENST00000593399 556 ntBASIC3.19□□□□□ -1.9
CASP4P49662 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.19□□□□□ -1.9
CASP4P49662 AC111188.2-201ENST00000529697 1387 ntBASIC3.19□□□□□ -1.9
CASP4P49662 MTND5P19-201ENST00000424872 1794 ntBASIC3.19□□□□□ -1.9
CASP4P49662 FAM35CP-201ENST00000554755 2470 ntBASIC3.19□□□□□ -1.9
CASP4P49662 GDI2P1-201ENST00000429312 1336 ntBASIC3.19□□□□□ -1.9
CASP4P49662 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CASP4P49662 ZNF833P-201ENST00000424938 1494 ntBASIC3.18□□□□□ -1.9
CASP4P49662 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CASP4P49662 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.18□□□□□ -1.9
CASP4P49662 IL23R-205ENST00000637002 2208 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CASP4P49662 CCDC178-213ENST00000583930 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
CASP4P49662 MS4A5-201ENST00000300190 722 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CASP4P49662 RNU6-236P-201ENST00000363886 106 ntBASIC3.18□□□□□ -1.9
CASP4P49662 DEFB109C-201ENST00000382575 264 ntBASIC3.18□□□□□ -1.9
CASP4P49662 DEFB109B-201ENST00000382656 264 ntBASIC3.18□□□□□ -1.9
CASP4P49662 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
CASP4P49662 SAR1AP2-201ENST00000392696 594 ntBASIC3.18□□□□□ -1.9
CASP4P49662 SNORA11.1-201ENST00000408133 129 ntBASIC3.18□□□□□ -1.9
CASP4P49662 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC3.18□□□□□ -1.9
CASP4P49662 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CASP4P49662 RPL7P46-201ENST00000425129 740 ntBASIC3.18□□□□□ -1.9
CASP4P49662 RPS29P6-201ENST00000438196 145 ntBASIC3.18□□□□□ -1.9
CASP4P49662 RSL24D1P3-201ENST00000449255 495 ntBASIC3.18□□□□□ -1.9
CASP4P49662 RPL27AP5-201ENST00000469428 449 ntBASIC3.18□□□□□ -1.9
CASP4P49662 AC084024.2-201ENST00000503480 791 ntBASIC3.18□□□□□ -1.9
CASP4P49662 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC3.18□□□□□ -1.9
CASP4P49662 AC016550.1-201ENST00000505348 785 ntBASIC3.18□□□□□ -1.9
CASP4P49662 AC010374.2-201ENST00000512933 535 ntBASIC3.18□□□□□ -1.9
CASP4P49662 AP001317.1-201ENST00000531194 960 ntBASIC3.18□□□□□ -1.9
CASP4P49662 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC3.18□□□□□ -1.9
CASP4P49662 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.18□□□□□ -1.9
CASP4P49662 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.18□□□□□ -1.9
CASP4P49662 AC034105.3-201ENST00000565294 442 ntBASIC3.18□□□□□ -1.9
CASP4P49662 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CASP4P49662 AC090330.1-201ENST00000588646 764 ntBASIC3.18□□□□□ -1.9
CASP4P49662 AC083760.1-201ENST00000589621 670 ntBASIC3.18□□□□□ -1.9
CASP4P49662 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
CASP4P49662 AP005137.2-201ENST00000609238 400 ntBASIC3.18□□□□□ -1.9
CASP4P49662 AL590240.3-201ENST00000621416 943 ntBASIC3.18□□□□□ -1.9
CASP4P49662 HDX-206ENST00000506585 6158 ntTSL 2 BASIC3.18□□□□□ -1.9
CASP4P49662 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CASP4P49662 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CASP4P49662 NUP58P1-201ENST00000502546 1738 ntBASIC3.18□□□□□ -1.9
CASP4P49662 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
CASP4P49662 AC103988.1-201ENST00000566382 2177 ntBASIC3.18□□□□□ -1.9
CASP4P49662 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.18□□□□□ -1.9
CASP4P49662 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
CASP4P49662 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.17□□□□□ -1.9
CASP4P49662 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
CASP4P49662 RNU1-35P-201ENST00000362782 153 ntBASIC3.17□□□□□ -1.9
CASP4P49662 RNU6-1066P-201ENST00000363573 105 ntBASIC3.17□□□□□ -1.9
CASP4P49662 SNORA40.4-201ENST00000390971 128 ntBASIC3.17□□□□□ -1.9
CASP4P49662 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC3.17□□□□□ -1.9
CASP4P49662 AC027644.1-201ENST00000419595 298 ntBASIC3.17□□□□□ -1.9
CASP4P49662 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.17□□□□□ -1.9
CASP4P49662 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.17□□□□□ -1.9
CASP4P49662 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC3.17□□□□□ -1.9
CASP4P49662 BLOC1S2P1-201ENST00000428431 301 ntBASIC3.17□□□□□ -1.9
CASP4P49662 RPL31P54-201ENST00000429803 370 ntBASIC3.17□□□□□ -1.9
CASP4P49662 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.17□□□□□ -1.9
CASP4P49662 ARF4P4-201ENST00000439608 520 ntBASIC3.17□□□□□ -1.9
CASP4P49662 AC092393.1-201ENST00000439625 742 ntBASIC3.17□□□□□ -1.9
CASP4P49662 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.17□□□□□ -1.9
CASP4P49662 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.17□□□□□ -1.9
CASP4P49662 AL121970.1-201ENST00000447557 929 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CASP4P49662 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.17□□□□□ -1.9
CASP4P49662 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.17□□□□□ -1.9
CASP4P49662 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CASP4P49662 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.17□□□□□ -1.9
CASP4P49662 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.17□□□□□ -1.9
CASP4P49662 AP002404.1-201ENST00000532005 451 ntBASIC3.17□□□□□ -1.9
CASP4P49662 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
CASP4P49662 TRAV37-201ENST00000553906 342 ntBASIC3.17□□□□□ -1.9
CASP4P49662 AC044913.1-201ENST00000557200 430 ntBASIC3.17□□□□□ -1.9
CASP4P49662 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.17□□□□□ -1.9
CASP4P49662 XIAPP1-201ENST00000603162 600 ntBASIC3.17□□□□□ -1.9
CASP4P49662 AL133393.1-201ENST00000603277 287 ntBASIC3.17□□□□□ -1.9
CASP4P49662 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.17□□□□□ -1.9
CASP4P49662 AC018755.4-201ENST00000619715 454 ntBASIC3.17□□□□□ -1.9
CASP4P49662 AC022509.4-201ENST00000621404 572 ntBASIC3.17□□□□□ -1.9
CASP4P49662 AC009039.2-201ENST00000624524 529 ntBASIC3.17□□□□□ -1.9
CASP4P49662 AP001002.2-201ENST00000625137 386 ntBASIC3.17□□□□□ -1.9
CASP4P49662 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 90.7 ms