Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
NKX2-1P43699 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
NKX2-1P43699 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.29□□□□□ -1.88
NKX2-1P43699 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC3.29□□□□□ -1.88
NKX2-1P43699 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-1P43699 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-1P43699 AC139713.2-214ENST00000642059 1811 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-1P43699 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-1P43699 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
NKX2-1P43699 RNVU1-6-201ENST00000364688 164 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-1P43699 AC025750.1-201ENST00000399891 379 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AL049693.1-201ENST00000402760 611 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 RPS4XP9-201ENST00000405151 780 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 MTND1P21-201ENST00000412991 285 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 NAP1L1P2-201ENST00000414182 1089 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-1P43699 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC3.29□□□□□ -1.88
NKX2-1P43699 MTND1P28-201ENST00000435623 950 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.29□□□□□ -1.88
NKX2-1P43699 UBE2V1P13-201ENST00000436983 439 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AL117351.1-201ENST00000438864 766 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-1P43699 AL138878.2-201ENST00000440581 1241 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 PHBP16-201ENST00000446318 950 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AP000542.1-201ENST00000448473 371 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-1P43699 AC091770.1-201ENST00000456513 373 ntTSL 2 BASIC3.29□□□□□ -1.88
NKX2-1P43699 SNORD42A-201ENST00000459584 64 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-1P43699 AP000797.1-201ENST00000478870 387 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AF213884.1-201ENST00000488102 463 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 ARL2BPP4-201ENST00000506854 471 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 LYRM7-202ENST00000507584 317 ntTSL 2 BASIC3.29□□□□□ -1.88
NKX2-1P43699 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-1P43699 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-1P43699 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-1P43699 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC3.29□□□□□ -1.88
NKX2-1P43699 KCTD9P2-201ENST00000512203 1013 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-1P43699 AC017037.2-201ENST00000513850 890 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AC022483.1-201ENST00000514020 567 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC3.29□□□□□ -1.88
NKX2-1P43699 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC3.29□□□□□ -1.88
NKX2-1P43699 AC116347.2-201ENST00000514912 523 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 RNU6-528P-201ENST00000516926 100 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.29□□□□□ -1.88
NKX2-1P43699 IGKV2D-19-201ENST00000523346 262 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AP003497.1-201ENST00000528472 562 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-1P43699 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.29□□□□□ -1.88
NKX2-1P43699 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.29□□□□□ -1.88
NKX2-1P43699 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-1P43699 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.29□□□□□ -1.88
NKX2-1P43699 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-1P43699 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-1P43699 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.29□□□□□ -1.88
NKX2-1P43699 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-1P43699 AC005771.1-201ENST00000585581 349 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 RSL24D1P11-201ENST00000591045 491 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AC119751.7-201ENST00000600494 245 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AC110741.2-201ENST00000605278 268 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AC092354.2-201ENST00000607786 514 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AC019193.2-201ENST00000610012 634 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AC012409.3-201ENST00000611343 981 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AC138749.5-201ENST00000611461 208 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AC116165.2-201ENST00000616705 206 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AL590240.3-201ENST00000621416 943 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AC079597.1-201ENST00000624306 508 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AL603839.4-201ENST00000624658 1005 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC3.29□□□□□ -1.88
NKX2-1P43699 MIR4275-201ENST00000636486 87 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
NKX2-1P43699 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-1P43699 LINC00630-205ENST00000440496 2101 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-1P43699 PABPC1P9-201ENST00000426076 1612 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.29□□□□□ -1.88
NKX2-1P43699 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.29□□□□□ -1.88
NKX2-1P43699 RAD17P1-201ENST00000418130 2042 ntBASIC3.29□□□□□ -1.88
NKX2-1P43699 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-1P43699 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-1P43699 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-1P43699 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC3.29□□□□□ -1.88
NKX2-1P43699 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NKX2-1P43699 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC3.28□□□□□ -1.88
NKX2-1P43699 EPC1-203ENST00000375110 3909 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NKX2-1P43699 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NKX2-1P43699 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NKX2-1P43699 RNU5F-6P-201ENST00000362979 116 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 RNY3P10-201ENST00000384764 102 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 MIR129-1-201ENST00000384972 72 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.28□□□□□ -1.88
NKX2-1P43699 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NKX2-1P43699 RHEBP3-201ENST00000411920 351 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AC007899.1-201ENST00000412776 775 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX2-1P43699 RPS27AP7-201ENST00000422792 455 ntBASIC3.28□□□□□ -1.88
NKX2-1P43699 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC3.28□□□□□ -1.88
NKX2-1P43699 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.2 ms