Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 AC004069.2-201ENST00000505438 1114 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 LINC02064-202ENST00000507876 403 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPN9P43378 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC4.01□□□□□ -1.77
PTPN9P43378 AC091965.2-201ENST00000512324 613 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 RN7SKP21-201ENST00000516503 220 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN9P43378 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPN9P43378 SPAG11B-207ENST00000528168 481 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPN9P43378 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPN9P43378 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC4.01□□□□□ -1.77
PTPN9P43378 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
PTPN9P43378 AC068993.2-201ENST00000546563 395 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPN9P43378 AC053481.4-201ENST00000583164 216 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 AC005255.1-201ENST00000593748 216 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 AC010680.3-201ENST00000604215 520 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 AL137849.1-201ENST00000604767 169 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 AL365503.1-201ENST00000605247 905 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 BCRP9-201ENST00000605312 388 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 DLEU2_1.1-201ENST00000612089 120 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 DLEU2_1.2-201ENST00000614667 120 ntBASIC4.01□□□□□ -1.77
PTPN9P43378 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.01□□□□□ -1.77
PTPN9P43378 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN9P43378 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
PTPN9P43378 MAPK10-372ENST00000641954 3413 ntBASIC4□□□□□ -1.77
PTPN9P43378 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4□□□□□ -1.77
PTPN9P43378 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PTPN9P43378 AKAP14-201ENST00000334356 608 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
PTPN9P43378 GTSF1L-201ENST00000373003 835 ntAPPRIS P3 BASIC4□□□□□ -1.77
PTPN9P43378 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC4□□□□□ -1.77
PTPN9P43378 SNORD51-201ENST00000384320 80 ntBASIC4□□□□□ -1.77
PTPN9P43378 RNY3P10-201ENST00000384764 102 ntBASIC4□□□□□ -1.77
PTPN9P43378 RNU6-628P-201ENST00000410675 107 ntBASIC4□□□□□ -1.77
PTPN9P43378 AC109780.2-201ENST00000413467 845 ntBASIC4□□□□□ -1.77
PTPN9P43378 B3GALNT1P1-201ENST00000420569 975 ntBASIC4□□□□□ -1.77
PTPN9P43378 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC4□□□□□ -1.77
PTPN9P43378 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC4□□□□□ -1.77
PTPN9P43378 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4□□□□□ -1.77
PTPN9P43378 AC098824.1-201ENST00000453565 980 ntBASIC4□□□□□ -1.77
PTPN9P43378 OR6K1P-201ENST00000456766 971 ntBASIC4□□□□□ -1.77
PTPN9P43378 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC4□□□□□ -1.77
PTPN9P43378 RNU6-956P-201ENST00000458868 103 ntBASIC4□□□□□ -1.77
PTPN9P43378 snoU13.3-201ENST00000459441 104 ntBASIC4□□□□□ -1.77
PTPN9P43378 VN1R105P-201ENST00000486595 910 ntBASIC4□□□□□ -1.77
PTPN9P43378 AC068724.1-201ENST00000487100 792 ntBASIC4□□□□□ -1.77
PTPN9P43378 AC034222.1-201ENST00000494052 532 ntBASIC4□□□□□ -1.77
PTPN9P43378 CBX3P3-201ENST00000508108 532 ntBASIC4□□□□□ -1.77
PTPN9P43378 LINC02496-201ENST00000509559 584 ntTSL 3 BASIC4□□□□□ -1.77
PTPN9P43378 PTGES3P3-201ENST00000511479 482 ntBASIC4□□□□□ -1.77
PTPN9P43378 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC4□□□□□ -1.77
PTPN9P43378 AC034159.1-201ENST00000513885 583 ntBASIC4□□□□□ -1.77
PTPN9P43378 AC010342.1-201ENST00000514047 877 ntBASIC4□□□□□ -1.77
PTPN9P43378 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4□□□□□ -1.77
PTPN9P43378 RNA5SP164-201ENST00000516533 110 ntBASIC4□□□□□ -1.77
PTPN9P43378 AC027801.4-201ENST00000518420 395 ntTSL 5 BASIC4□□□□□ -1.77
PTPN9P43378 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC4□□□□□ -1.77
PTPN9P43378 AL139174.1-201ENST00000531489 886 ntBASIC4□□□□□ -1.77
PTPN9P43378 AC013828.2-201ENST00000532487 235 ntBASIC4□□□□□ -1.77
PTPN9P43378 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4□□□□□ -1.77
PTPN9P43378 OR6C73P-201ENST00000546432 358 ntBASIC4□□□□□ -1.77
PTPN9P43378 EEF1B2P4-201ENST00000551398 348 ntBASIC4□□□□□ -1.77
PTPN9P43378 AC025265.2-201ENST00000551905 478 ntTSL 3 BASIC4□□□□□ -1.77
PTPN9P43378 AC009101.1-201ENST00000568135 242 ntBASIC4□□□□□ -1.77
PTPN9P43378 MIR3160-1-201ENST00000577972 85 ntBASIC4□□□□□ -1.77
PTPN9P43378 MIR4286-201ENST00000580651 93 ntBASIC4□□□□□ -1.77
PTPN9P43378 AC103987.3-201ENST00000582071 292 ntBASIC4□□□□□ -1.77
PTPN9P43378 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4□□□□□ -1.77
PTPN9P43378 MIR4307-201ENST00000582802 84 ntBASIC4□□□□□ -1.77
PTPN9P43378 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4□□□□□ -1.77
PTPN9P43378 AC067959.1-201ENST00000604334 379 ntBASIC4□□□□□ -1.77
PTPN9P43378 MIR6875-201ENST00000617506 72 ntBASIC4□□□□□ -1.77
PTPN9P43378 AC068724.3-201ENST00000625906 87 ntBASIC4□□□□□ -1.77
PTPN9P43378 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PTPN9P43378 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC4□□□□□ -1.77
PTPN9P43378 CNOT10-206ENST00000454516 2760 ntTSL 2 BASIC4□□□□□ -1.77
PTPN9P43378 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
PTPN9P43378 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN9P43378 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN9P43378 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN9P43378 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN9P43378 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN9P43378 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN9P43378 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
PTPN9P43378 RNU6-359P-201ENST00000365466 108 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 RNU6-744P-201ENST00000365557 107 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 RNU6-1316P-201ENST00000384242 108 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 MIR124-3-201ENST00000384866 87 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 U8.14-201ENST00000390843 143 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 RNU6-821P-201ENST00000390995 107 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 RNU2-15P-201ENST00000410692 191 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 AF228730.2-201ENST00000438784 848 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.99□□□□□ -1.77
PTPN9P43378 AP000542.1-201ENST00000448473 371 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 AP000926.1-201ENST00000479573 241 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 BTF3L4P4-201ENST00000506381 449 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 AC034234.1-202ENST00000508696 339 ntTSL 3 BASIC3.99□□□□□ -1.77
PTPN9P43378 FABP5P5-201ENST00000515537 406 ntBASIC3.99□□□□□ -1.77
PTPN9P43378 SCARNA14-201ENST00000516903 136 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 88.8 ms