Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 FCF1P2-201ENST00000415284 583 ntBASIC3.25□□□□□ -1.89
SSR1P43307 MTCO3P12-201ENST00000416718 547 ntBASIC3.25□□□□□ -1.89
SSR1P43307 AL353678.1-201ENST00000422735 741 ntBASIC3.25□□□□□ -1.89
SSR1P43307 AC233981.1-201ENST00000423224 461 ntBASIC3.25□□□□□ -1.89
SSR1P43307 MTATP6P11-201ENST00000428071 670 ntBASIC3.25□□□□□ -1.89
SSR1P43307 AC012497.1-201ENST00000429392 575 ntBASIC3.25□□□□□ -1.89
SSR1P43307 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.25□□□□□ -1.89
SSR1P43307 VN1R34P-201ENST00000447387 883 ntBASIC3.25□□□□□ -1.89
SSR1P43307 PRDX3P3-201ENST00000447765 522 ntBASIC3.25□□□□□ -1.89
SSR1P43307 COX6CP18-201ENST00000448769 222 ntBASIC3.25□□□□□ -1.89
SSR1P43307 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.25□□□□□ -1.89
SSR1P43307 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.25□□□□□ -1.89
SSR1P43307 OR2A20P-203ENST00000498397 1268 ntBASIC3.25□□□□□ -1.89
SSR1P43307 MTCO2P9-201ENST00000503214 694 ntBASIC3.25□□□□□ -1.89
SSR1P43307 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC3.25□□□□□ -1.89
SSR1P43307 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.25□□□□□ -1.89
SSR1P43307 RAC1P5-201ENST00000512182 576 ntBASIC3.25□□□□□ -1.89
SSR1P43307 GMPSP1-201ENST00000514075 579 ntBASIC3.25□□□□□ -1.89
SSR1P43307 RNA5SP76-201ENST00000516277 87 ntBASIC3.25□□□□□ -1.89
SSR1P43307 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
SSR1P43307 HMGB1P1-201ENST00000522557 636 ntBASIC3.25□□□□□ -1.89
SSR1P43307 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.25□□□□□ -1.89
SSR1P43307 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.25□□□□□ -1.89
SSR1P43307 AP003385.6-201ENST00000531603 374 ntBASIC3.25□□□□□ -1.89
SSR1P43307 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC3.25□□□□□ -1.89
SSR1P43307 GAS5-AS1-201ENST00000602767 694 ntBASIC3.25□□□□□ -1.89
SSR1P43307 AC012119.1-201ENST00000603184 222 ntBASIC3.25□□□□□ -1.89
SSR1P43307 AC073968.1-201ENST00000618594 637 ntBASIC3.25□□□□□ -1.89
SSR1P43307 ABBA01000935.2-201ENST00000637477 838 ntBASIC3.25□□□□□ -1.89
SSR1P43307 AC130650.2-201ENST00000618736 2403 ntBASIC3.25□□□□□ -1.89
SSR1P43307 CACNB4-238ENST00000636901 7706 ntTSL 5 BASIC3.25□□□□□ -1.89
SSR1P43307 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.25□□□□□ -1.89
SSR1P43307 PIK3CA-201ENST00000263967 9093 ntAPPRIS P1 TSL 2 BASIC3.25□□□□□ -1.89
SSR1P43307 CUL1P1-201ENST00000509510 2425 ntBASIC3.24□□□□□ -1.89
SSR1P43307 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
SSR1P43307 RNU6-582P-201ENST00000362989 107 ntBASIC3.24□□□□□ -1.89
SSR1P43307 SNORD82-201ENST00000365530 70 ntBASIC3.24□□□□□ -1.89
SSR1P43307 TMCO2-201ENST00000372766 739 ntAPPRIS P1 TSL 1 (best) BASIC3.24□□□□□ -1.89
SSR1P43307 IARS-201ENST00000375627 697 ntTSL 3 BASIC3.24□□□□□ -1.89
SSR1P43307 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC3.24□□□□□ -1.89
SSR1P43307 MIR7-3-201ENST00000384898 110 ntBASIC3.24□□□□□ -1.89
SSR1P43307 U3.19-201ENST00000390893 196 ntBASIC3.24□□□□□ -1.89
SSR1P43307 RNA5SP274-201ENST00000410484 108 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AC019070.1-201ENST00000415008 1024 ntBASIC3.24□□□□□ -1.89
SSR1P43307 SFR1P2-201ENST00000421841 730 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AC005300.1-201ENST00000428401 373 ntBASIC3.24□□□□□ -1.89
SSR1P43307 YME1L1P1-201ENST00000429435 297 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AL050321.1-201ENST00000432363 400 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AC000041.1-201ENST00000439655 175 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AC017099.1-201ENST00000448261 1028 ntBASIC3.24□□□□□ -1.89
SSR1P43307 ELOCP23-201ENST00000452014 332 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AL672167.3-201ENST00000465951 960 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.24□□□□□ -1.89
SSR1P43307 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
SSR1P43307 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC3.24□□□□□ -1.89
SSR1P43307 AC048346.1-201ENST00000510247 144 ntBASIC3.24□□□□□ -1.89
SSR1P43307 OR8K4P-201ENST00000534608 872 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.24□□□□□ -1.89
SSR1P43307 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC3.24□□□□□ -1.89
SSR1P43307 MIR5194-201ENST00000582634 120 ntBASIC3.24□□□□□ -1.89
SSR1P43307 UBL5P2-201ENST00000583788 219 ntBASIC3.24□□□□□ -1.89
SSR1P43307 U73023.1-201ENST00000603134 700 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AC012669.1-201ENST00000603209 283 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AP000787.2-201ENST00000604432 568 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AL137843.1-201ENST00000605078 385 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AC006329.2-201ENST00000611491 394 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AL162574.2-201ENST00000614618 657 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AC105227.2-201ENST00000615075 605 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AL138880.2-201ENST00000616214 239 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AC068722.2-201ENST00000618734 544 ntBASIC3.24□□□□□ -1.89
SSR1P43307 AC010297.1-201ENST00000623948 149 ntBASIC3.24□□□□□ -1.89
SSR1P43307 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.24□□□□□ -1.89
SSR1P43307 FO624990.1-201ENST00000636373 85 ntBASIC3.24□□□□□ -1.89
SSR1P43307 MTND2P41-201ENST00000637599 773 ntBASIC3.24□□□□□ -1.89
SSR1P43307 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.24□□□□□ -1.89
SSR1P43307 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSR1P43307 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.23□□□□□ -1.89
SSR1P43307 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.23□□□□□ -1.89
SSR1P43307 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC3.23□□□□□ -1.89
SSR1P43307 SPHAR-201ENST00000366688 648 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SSR1P43307 RNU6-657P-201ENST00000383904 107 ntBASIC3.23□□□□□ -1.89
SSR1P43307 SNORD116-23-201ENST00000384645 92 ntBASIC3.23□□□□□ -1.89
SSR1P43307 MIR627-201ENST00000384979 97 ntBASIC3.23□□□□□ -1.89
SSR1P43307 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC3.23□□□□□ -1.89
SSR1P43307 FAT1P1-201ENST00000406588 507 ntBASIC3.23□□□□□ -1.89
SSR1P43307 AL159990.1-201ENST00000415119 337 ntTSL 3 BASIC3.23□□□□□ -1.89
SSR1P43307 AL354733.1-203ENST00000417672 495 ntTSL 5 BASIC3.23□□□□□ -1.89
SSR1P43307 AC005345.1-201ENST00000431868 217 ntBASIC3.23□□□□□ -1.89
SSR1P43307 AL159990.2-201ENST00000436491 337 ntTSL 3 BASIC3.23□□□□□ -1.89
SSR1P43307 RPS12P18-201ENST00000442381 270 ntBASIC3.23□□□□□ -1.89
SSR1P43307 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.23□□□□□ -1.89
SSR1P43307 LINC00278-202ENST00000444263 587 ntTSL 3 BASIC3.23□□□□□ -1.89
SSR1P43307 MOB1AP2-201ENST00000446060 614 ntBASIC3.23□□□□□ -1.89
SSR1P43307 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.23□□□□□ -1.89
SSR1P43307 Z75741.1-201ENST00000446793 314 ntBASIC3.23□□□□□ -1.89
SSR1P43307 AL590664.1-201ENST00000448065 339 ntBASIC3.23□□□□□ -1.89
SSR1P43307 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.23□□□□□ -1.89
SSR1P43307 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.23□□□□□ -1.89
SSR1P43307 AC008379.1-201ENST00000463655 464 ntBASIC3.23□□□□□ -1.89
SSR1P43307 PABPC1P3-201ENST00000469174 459 ntBASIC3.23□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms