Protein–RNA interactions for Protein: P34897

SHMT2, Serine hydroxymethyltransferase, mitochondrial, humanhuman

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2P34897 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC3.02□□□□□ -1.93
SHMT2P34897 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.02□□□□□ -1.93
SHMT2P34897 PRELID3BP8-201ENST00000604148 295 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SHMT2P34897 AC091946.2-201ENST00000606105 291 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.02□□□□□ -1.93
SHMT2P34897 AC008083.4-201ENST00000615076 444 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 AC073968.1-201ENST00000618594 637 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 AC010975.3-201ENST00000618727 978 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 CR381572.1-201ENST00000625098 102 ntBASIC3.02□□□□□ -1.93
SHMT2P34897 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
SHMT2P34897 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SHMT2P34897 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.02□□□□□ -1.93
SHMT2P34897 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
SHMT2P34897 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
SHMT2P34897 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.01□□□□□ -1.93
SHMT2P34897 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.01□□□□□ -1.93
SHMT2P34897 SNORD65.1-201ENST00000390889 71 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 RNU6-837P-201ENST00000391056 108 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 MTND4LP20-201ENST00000402379 270 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 RNU4-78P-201ENST00000410940 126 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.01□□□□□ -1.93
SHMT2P34897 MTCO3P1-205ENST00000422088 832 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.01□□□□□ -1.93
SHMT2P34897 MTCO1P3-201ENST00000429327 192 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 OR2B8P-201ENST00000432841 938 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
SHMT2P34897 AC127537.2-201ENST00000439258 465 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 AC092393.1-201ENST00000439625 742 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 HSPE1P28-201ENST00000443139 211 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 HMGB3P6-201ENST00000444896 598 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 AC016696.1-201ENST00000446949 318 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 AC079776.3-201ENST00000450665 370 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC3.01□□□□□ -1.93
SHMT2P34897 AC117465.1-201ENST00000457125 522 ntTSL 3 BASIC3.01□□□□□ -1.93
SHMT2P34897 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.01□□□□□ -1.93
SHMT2P34897 RPL5P24-201ENST00000463742 885 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC3.01□□□□□ -1.93
SHMT2P34897 VN1R17P-201ENST00000472048 1090 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 VPS26AP1-201ENST00000483197 979 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC3.01□□□□□ -1.93
SHMT2P34897 RN7SKP244-201ENST00000516513 307 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 AC104012.1-201ENST00000517848 719 ntTSL 3 BASIC3.01□□□□□ -1.93
SHMT2P34897 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.01□□□□□ -1.93
SHMT2P34897 AC118942.1-201ENST00000529674 1035 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC3.01□□□□□ -1.93
SHMT2P34897 MIR5708-201ENST00000579723 85 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.01□□□□□ -1.93
SHMT2P34897 AL022067.1-201ENST00000602426 454 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 AC024060.1-201ENST00000607052 494 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 AC100793.4-201ENST00000613683 429 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 AC104985.3-201ENST00000623479 597 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 AC004808.1-201ENST00000627671 721 ntBASIC3.01□□□□□ -1.93
SHMT2P34897 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
SHMT2P34897 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3□□□□□ -1.93
SHMT2P34897 AL645568.2-201ENST00000432815 1337 ntBASIC3□□□□□ -1.93
SHMT2P34897 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3□□□□□ -1.93
SHMT2P34897 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SHMT2P34897 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3□□□□□ -1.93
SHMT2P34897 RNU6-1066P-201ENST00000363573 105 ntBASIC3□□□□□ -1.93
SHMT2P34897 RNVU1-3-201ENST00000364313 161 ntBASIC3□□□□□ -1.93
SHMT2P34897 SNORA51.6-201ENST00000384151 125 ntBASIC3□□□□□ -1.93
SHMT2P34897 Y_RNA.578-201ENST00000390903 88 ntBASIC3□□□□□ -1.93
SHMT2P34897 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3□□□□□ -1.93
SHMT2P34897 AL024474.1-201ENST00000404655 591 ntBASIC3□□□□□ -1.93
SHMT2P34897 MTND4P3-201ENST00000417829 541 ntBASIC3□□□□□ -1.93
SHMT2P34897 DPRXP1-201ENST00000426312 460 ntBASIC3□□□□□ -1.93
SHMT2P34897 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3□□□□□ -1.93
SHMT2P34897 RNF2P1-201ENST00000442955 1010 ntBASIC3□□□□□ -1.93
SHMT2P34897 MTCO1P48-201ENST00000448024 1096 ntBASIC3□□□□□ -1.93
SHMT2P34897 AC112492.1-201ENST00000449607 712 ntBASIC3□□□□□ -1.93
SHMT2P34897 AP001992.1-205ENST00000462248 379 ntBASIC3□□□□□ -1.93
SHMT2P34897 RPL27AP5-201ENST00000469428 449 ntBASIC3□□□□□ -1.93
SHMT2P34897 AC010301.1-201ENST00000473936 355 ntBASIC3□□□□□ -1.93
SHMT2P34897 AC104982.1-201ENST00000478775 574 ntBASIC3□□□□□ -1.93
SHMT2P34897 AC108860.1-201ENST00000484521 383 ntBASIC3□□□□□ -1.93
SHMT2P34897 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC3□□□□□ -1.93
SHMT2P34897 AC008243.1-202ENST00000506527 481 ntTSL 5 BASIC3□□□□□ -1.93
SHMT2P34897 OTUD4-208ENST00000509620 864 ntTSL 1 (best) BASIC3□□□□□ -1.93
SHMT2P34897 RN7SKP272-201ENST00000516988 232 ntBASIC3□□□□□ -1.93
SHMT2P34897 AC027309.2-201ENST00000520566 192 ntBASIC3□□□□□ -1.93
SHMT2P34897 PSMA2P1-201ENST00000526365 646 ntBASIC3□□□□□ -1.93
SHMT2P34897 AP002404.1-201ENST00000532005 451 ntBASIC3□□□□□ -1.93
SHMT2P34897 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3□□□□□ -1.93
SHMT2P34897 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3□□□□□ -1.93
SHMT2P34897 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3□□□□□ -1.93
SHMT2P34897 GTF2IP8-201ENST00000560687 584 ntBASIC3□□□□□ -1.93
SHMT2P34897 MIR4325-201ENST00000583049 90 ntBASIC3□□□□□ -1.93
SHMT2P34897 AC006539.2-201ENST00000601729 572 ntBASIC3□□□□□ -1.93
SHMT2P34897 AF129408.1-201ENST00000608767 431 ntBASIC3□□□□□ -1.93
SHMT2P34897 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3□□□□□ -1.93
SHMT2P34897 AL109620.1-201ENST00000618738 1197 ntBASIC3□□□□□ -1.93
SHMT2P34897 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3□□□□□ -1.93
SHMT2P34897 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC3□□□□□ -1.93
SHMT2P34897 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3□□□□□ -1.93
SHMT2P34897 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3□□□□□ -1.93
SHMT2P34897 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
SHMT2P34897 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3□□□□□ -1.93
SHMT2P34897 HSP90AA4P-202ENST00000506915 2228 ntBASIC3□□□□□ -1.93
SHMT2P34897 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 83.1 ms