Protein–RNA interactions for Protein: P31645

SLC6A4, Sodium-dependent serotonin transporter, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4P31645 TRIM60P10Y-201ENST00000425589 751 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 ELOCP14-201ENST00000428070 331 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC6A4P31645 TRIM60P8Y-201ENST00000436338 762 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 HMGB1P31-201ENST00000437242 427 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 AC127537.2-201ENST00000439258 465 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 ELOCP7-201ENST00000439968 331 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 NFU1P2-201ENST00000448700 469 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 BX276092.4-201ENST00000452056 248 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC6A4P31645 AC079382.1-201ENST00000493346 557 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 TNFAIP8-205ENST00000504642 711 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC6A4P31645 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC6A4P31645 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.44□□□□□ -1.7
SLC6A4P31645 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC6A4P31645 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SLC6A4P31645 RNA5SP519-201ENST00000516480 119 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 Y_RNA.693-201ENST00000516641 110 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 RNU6-445P-201ENST00000516949 107 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 AC090151.1-201ENST00000520784 730 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 AP003730.1-201ENST00000524605 285 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.44□□□□□ -1.7
SLC6A4P31645 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC6A4P31645 AC123904.2-201ENST00000548059 300 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC4.44□□□□□ -1.7
SLC6A4P31645 AL352979.3-201ENST00000553515 247 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 AL356432.3-201ENST00000568952 465 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 RN7SL176P-201ENST00000580352 264 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 AC091135.1-201ENST00000585943 307 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 SLC25A36P1-201ENST00000590111 465 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 BNIP3P30-201ENST00000601184 574 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 AL009028.1-201ENST00000604895 802 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 AL023881.1-201ENST00000621088 301 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 MIR4496-201ENST00000635896 61 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 AC008013.2-202ENST00000637965 364 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
SLC6A4P31645 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC6A4P31645 MAPK10-304ENST00000641341 3984 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 SLC10A2-201ENST00000245312 3779 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
SLC6A4P31645 CR848007.1-201ENST00000442354 1699 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC4.44□□□□□ -1.7
SLC6A4P31645 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
SLC6A4P31645 AC011460.1-201ENST00000636268 1834 ntBASIC4.44□□□□□ -1.7
SLC6A4P31645 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SLC6A4P31645 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
SLC6A4P31645 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC6A4P31645 AC138915.3-201ENST00000562908 1389 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 AGTR1-202ENST00000402260 2172 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC6A4P31645 AC009902.3-201ENST00000606235 2172 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.43□□□□□ -1.7
SLC6A4P31645 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC6A4P31645 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
SLC6A4P31645 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC6A4P31645 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
SLC6A4P31645 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SLC6A4P31645 MIR383-201ENST00000362257 73 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 RNU1-14P-201ENST00000362759 152 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC4.43□□□□□ -1.7
SLC6A4P31645 Y_RNA.390-201ENST00000383932 102 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 MTND4LP20-201ENST00000402379 270 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 VDAC1P9-201ENST00000412766 841 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 AL117381.1-201ENST00000412972 374 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC6A4P31645 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC6A4P31645 AMMECR1LP1-201ENST00000415152 841 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 CCDC58P2-201ENST00000417131 366 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 USP9YP27-201ENST00000418455 438 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 RPL36AP36-201ENST00000418616 301 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC6A4P31645 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC6A4P31645 MTCO2P19-201ENST00000427513 598 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 OR51AB1P-201ENST00000429046 620 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 AC119618.1-201ENST00000434191 222 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 MTCYBP45-201ENST00000435243 565 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 AL662791.1-201ENST00000441992 928 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC6A4P31645 RPL23AP20-201ENST00000447965 421 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 MTND1P9-201ENST00000453775 944 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 RPL7AP28-201ENST00000464513 571 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 RN7SL41P-201ENST00000476144 297 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 OR5H5P-201ENST00000503164 928 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 PARP4P3-201ENST00000510265 317 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 AC004704.1-201ENST00000511219 583 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC6A4P31645 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SLC6A4P31645 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC6A4P31645 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC6A4P31645 MRPL49P2-201ENST00000521066 465 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 AP000907.2-201ENST00000530827 353 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC6A4P31645 MFAP5-211ENST00000540087 492 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SLC6A4P31645 AL512360.1-201ENST00000555346 234 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 AC025884.1-201ENST00000556034 378 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC4.43□□□□□ -1.7
SLC6A4P31645 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.43□□□□□ -1.7
SLC6A4P31645 AC025678.1-201ENST00000567861 338 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
SLC6A4P31645 AC068790.5-201ENST00000602741 355 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 AC068790.3-201ENST00000602988 553 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 AC008536.2-201ENST00000607284 349 ntBASIC4.43□□□□□ -1.7
SLC6A4P31645 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC4.43□□□□□ -1.7
SLC6A4P31645 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms