Protein–RNA interactions for Protein: P24928

POLR2A, DNA-directed RNA polymerase II subunit RPB1, humanhuman

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2AP24928 HMGB3P20-201ENST00000417997 600 ntBASIC4.49□□□□□ -1.69
POLR2AP24928 REREP1Y-201ENST00000422655 198 ntBASIC4.49□□□□□ -1.69
POLR2AP24928 AL590302.1-201ENST00000431017 359 ntTSL 2 BASIC4.49□□□□□ -1.69
POLR2AP24928 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC4.49□□□□□ -1.69
POLR2AP24928 REREP2Y-201ENST00000439103 200 ntBASIC4.49□□□□□ -1.69
POLR2AP24928 ANKRD30BP3-201ENST00000444850 1070 ntBASIC4.49□□□□□ -1.69
POLR2AP24928 AC022364.2-201ENST00000457963 554 ntBASIC4.49□□□□□ -1.69
POLR2AP24928 AP000852.1-201ENST00000472460 573 ntBASIC4.49□□□□□ -1.69
POLR2AP24928 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC4.49□□□□□ -1.69
POLR2AP24928 AC026784.1-201ENST00000507986 352 ntBASIC4.49□□□□□ -1.69
POLR2AP24928 AC006499.2-201ENST00000513470 337 ntBASIC4.49□□□□□ -1.69
POLR2AP24928 SNORA20.3-201ENST00000516880 132 ntBASIC4.49□□□□□ -1.69
POLR2AP24928 AC048387.1-201ENST00000518428 494 ntTSL 3 BASIC4.49□□□□□ -1.69
POLR2AP24928 RGS4-207ENST00000527809 817 ntTSL 4 BASIC4.49□□□□□ -1.69
POLR2AP24928 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.49□□□□□ -1.69
POLR2AP24928 AC112187.2-201ENST00000604345 283 ntBASIC4.49□□□□□ -1.69
POLR2AP24928 AC093788.1-201ENST00000609356 927 ntBASIC4.49□□□□□ -1.69
POLR2AP24928 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC4.49□□□□□ -1.69
POLR2AP24928 AC145207.9-201ENST00000623802 325 ntBASIC4.49□□□□□ -1.69
POLR2AP24928 CDR1-202ENST00000625883 1485 ntBASIC4.49□□□□□ -1.69
POLR2AP24928 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC4.49□□□□□ -1.69
POLR2AP24928 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC4.49□□□□□ -1.69
POLR2AP24928 OR5BR1P-201ENST00000524992 1330 ntBASIC4.49□□□□□ -1.69
POLR2AP24928 FAM169A-203ENST00000510496 5810 ntTSL 5 BASIC4.49□□□□□ -1.69
POLR2AP24928 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.48□□□□□ -1.69
POLR2AP24928 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
POLR2AP24928 FTX-210ENST00000603037 8347 ntTSL 5 BASIC4.48□□□□□ -1.69
POLR2AP24928 AP001642.1-201ENST00000624727 2117 ntBASIC4.48□□□□□ -1.69
POLR2AP24928 CSNK1G3-203ENST00000361991 2424 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
POLR2AP24928 Y_RNA.1-201ENST00000352915 104 ntBASIC4.48□□□□□ -1.69
POLR2AP24928 Y_RNA.481-201ENST00000384373 102 ntBASIC4.48□□□□□ -1.69
POLR2AP24928 AL356057.2-201ENST00000403318 432 ntBASIC4.48□□□□□ -1.69
POLR2AP24928 RNA5SP120-201ENST00000410900 112 ntBASIC4.48□□□□□ -1.69
POLR2AP24928 AC017078.1-201ENST00000416146 368 ntBASIC4.48□□□□□ -1.69
POLR2AP24928 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
POLR2AP24928 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC4.48□□□□□ -1.69
POLR2AP24928 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC4.48□□□□□ -1.69
POLR2AP24928 AC012158.1-204ENST00000483430 465 ntBASIC4.48□□□□□ -1.69
POLR2AP24928 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.48□□□□□ -1.69
POLR2AP24928 AC068993.1-201ENST00000546724 589 ntBASIC4.48□□□□□ -1.69
POLR2AP24928 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC4.48□□□□□ -1.69
POLR2AP24928 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.48□□□□□ -1.69
POLR2AP24928 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.48□□□□□ -1.69
POLR2AP24928 MTCO3P13-201ENST00000577757 781 ntBASIC4.48□□□□□ -1.69
POLR2AP24928 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
POLR2AP24928 AC015871.5-202ENST00000623252 701 ntBASIC4.48□□□□□ -1.69
POLR2AP24928 LINC02086-205ENST00000628749 679 ntTSL 5 BASIC4.48□□□□□ -1.69
POLR2AP24928 AC026634.1-201ENST00000634369 198 ntBASIC4.48□□□□□ -1.69
POLR2AP24928 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC4.48□□□□□ -1.69
POLR2AP24928 CRYM-AS1-204ENST00000637983 556 ntBASIC4.48□□□□□ -1.69
POLR2AP24928 AC073130.1-201ENST00000457033 1958 ntTSL 2 BASIC4.48□□□□□ -1.69
POLR2AP24928 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
POLR2AP24928 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
POLR2AP24928 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.48□□□□□ -1.69
POLR2AP24928 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
POLR2AP24928 OR6Y1-202ENST00000641282 3702 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
POLR2AP24928 KRTAP15-1-201ENST00000334067 671 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
POLR2AP24928 Y_RNA.295-201ENST00000364918 102 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 Y_RNA.372-201ENST00000365599 102 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 FCF1P10-201ENST00000407590 479 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 VN1R8P-201ENST00000407739 893 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 RNU6-575P-201ENST00000411326 105 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 SRGAP3-AS1-201ENST00000414633 428 ntTSL 2 BASIC4.47□□□□□ -1.69
POLR2AP24928 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC4.47□□□□□ -1.69
POLR2AP24928 AC012498.1-201ENST00000424037 437 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC4.47□□□□□ -1.69
POLR2AP24928 AC073069.1-201ENST00000428657 441 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 CYCSP4-201ENST00000429682 331 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 MTND5P14-201ENST00000441481 1267 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 AC132479.1-201ENST00000449160 144 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 MTCO3P20-201ENST00000454926 688 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC4.47□□□□□ -1.69
POLR2AP24928 LINC01036-201ENST00000458683 858 ntTSL 3 BASIC4.47□□□□□ -1.69
POLR2AP24928 ARL4AP2-201ENST00000507378 601 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 AC108156.1-201ENST00000507849 481 ntTSL 3 BASIC4.47□□□□□ -1.69
POLR2AP24928 OR4A12P-201ENST00000530847 918 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 HPRT1P3-201ENST00000539521 576 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 AK6P1-201ENST00000540219 478 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.47□□□□□ -1.69
POLR2AP24928 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.47□□□□□ -1.69
POLR2AP24928 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.47□□□□□ -1.69
POLR2AP24928 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC4.47□□□□□ -1.69
POLR2AP24928 CDK15-204ENST00000450471 3659 ntAPPRIS ALT1 TSL 1 (best) BASIC4.47□□□□□ -1.69
POLR2AP24928 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
POLR2AP24928 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC4.47□□□□□ -1.69
POLR2AP24928 FAM135A-210ENST00000505868 5173 ntTSL 5 BASIC4.47□□□□□ -1.69
POLR2AP24928 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
POLR2AP24928 AC020633.1-201ENST00000468439 2247 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 DEPDC1-202ENST00000456315 5331 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
POLR2AP24928 TLR10-206ENST00000508334 2616 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
POLR2AP24928 RNU6-1090P-201ENST00000364065 94 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC4.47□□□□□ -1.69
POLR2AP24928 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.47□□□□□ -1.69
POLR2AP24928 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC4.47□□□□□ -1.69
POLR2AP24928 AC073614.1-201ENST00000438690 650 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 PSPHP1-201ENST00000450062 261 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 MEMO1P3-201ENST00000459811 302 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC4.47□□□□□ -1.69
POLR2AP24928 RNU6-885P-201ENST00000516607 104 ntBASIC4.47□□□□□ -1.69
POLR2AP24928 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC4.47□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 95 ms