Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIG1P18858 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LIG1P18858 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.64□□□□□ -1.51
LIG1P18858 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LIG1P18858 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC5.64□□□□□ -1.51
LIG1P18858 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LIG1P18858 MIR369-201ENST00000362155 70 ntBASIC5.64□□□□□ -1.51
LIG1P18858 RNU6-463P-201ENST00000384340 107 ntBASIC5.64□□□□□ -1.51
LIG1P18858 RNU6-831P-201ENST00000384548 107 ntBASIC5.64□□□□□ -1.51
LIG1P18858 MIR514A2-201ENST00000385131 88 ntBASIC5.64□□□□□ -1.51
LIG1P18858 MIR514A3-201ENST00000385132 88 ntBASIC5.64□□□□□ -1.51
LIG1P18858 DSTNP4-201ENST00000399472 474 ntBASIC5.64□□□□□ -1.51
LIG1P18858 CXCL8-202ENST00000401931 700 ntAPPRIS ALT1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIG1P18858 Y_RNA.615-201ENST00000410769 117 ntBASIC5.64□□□□□ -1.51
LIG1P18858 RNU6-193P-201ENST00000410977 107 ntBASIC5.64□□□□□ -1.51
LIG1P18858 AL162411.1-201ENST00000413145 526 ntTSL 2 BASIC5.64□□□□□ -1.51
LIG1P18858 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.64□□□□□ -1.51
LIG1P18858 GJA6P-201ENST00000415117 1042 ntBASIC5.64□□□□□ -1.51
LIG1P18858 RPL36AP36-201ENST00000418616 301 ntBASIC5.64□□□□□ -1.51
LIG1P18858 ATP2B2-IT2-201ENST00000419591 507 ntTSL 2 BASIC5.64□□□□□ -1.51
LIG1P18858 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC5.64□□□□□ -1.51
LIG1P18858 AL031584.1-201ENST00000447169 754 ntBASIC5.64□□□□□ -1.51
LIG1P18858 IGHV5-78-201ENST00000450948 295 ntBASIC5.64□□□□□ -1.51
LIG1P18858 AL163540.1-201ENST00000485382 386 ntBASIC5.64□□□□□ -1.51
LIG1P18858 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC5.64□□□□□ -1.51
LIG1P18858 AC110792.2-201ENST00000510278 224 ntBASIC5.64□□□□□ -1.51
LIG1P18858 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC5.64□□□□□ -1.51
LIG1P18858 AC018797.3-201ENST00000513388 1241 ntBASIC5.64□□□□□ -1.51
LIG1P18858 AC114797.1-201ENST00000514003 728 ntBASIC5.64□□□□□ -1.51
LIG1P18858 SNORD27.1-201ENST00000516319 72 ntBASIC5.64□□□□□ -1.51
LIG1P18858 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.64□□□□□ -1.51
LIG1P18858 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.64□□□□□ -1.51
LIG1P18858 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LIG1P18858 FRG2DP-202ENST00000566967 323 ntBASIC5.64□□□□□ -1.51
LIG1P18858 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC5.64□□□□□ -1.51
LIG1P18858 AC008737.2-201ENST00000599446 118 ntBASIC5.64□□□□□ -1.51
LIG1P18858 RNF138P2-201ENST00000603490 592 ntBASIC5.64□□□□□ -1.51
LIG1P18858 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC5.64□□□□□ -1.51
LIG1P18858 EIF3FP1-201ENST00000613970 806 ntBASIC5.64□□□□□ -1.51
LIG1P18858 AC040168.1-201ENST00000623594 991 ntBASIC5.64□□□□□ -1.51
LIG1P18858 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIG1P18858 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIG1P18858 BCLAF1P2-201ENST00000624956 2609 ntBASIC5.64□□□□□ -1.51
LIG1P18858 ASNSP3-201ENST00000451989 1306 ntBASIC5.64□□□□□ -1.51
LIG1P18858 FGF12-204ENST00000445105 5406 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
LIG1P18858 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIG1P18858 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC5.64□□□□□ -1.51
LIG1P18858 MED12L-201ENST00000273432 6401 ntTSL 2 BASIC5.64□□□□□ -1.51
LIG1P18858 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
LIG1P18858 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC5.64□□□□□ -1.51
LIG1P18858 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC5.64□□□□□ -1.51
LIG1P18858 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.64□□□□□ -1.51
LIG1P18858 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LIG1P18858 AC097714.1-201ENST00000511272 1647 ntBASIC5.63□□□□□ -1.51
LIG1P18858 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LIG1P18858 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LIG1P18858 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIG1P18858 RNU6-28P-201ENST00000362378 107 ntBASIC5.63□□□□□ -1.51
LIG1P18858 SNORA58B-201ENST00000364259 136 ntBASIC5.63□□□□□ -1.51
LIG1P18858 RNU4-48P-201ENST00000365559 182 ntBASIC5.63□□□□□ -1.51
LIG1P18858 SNORA66-201ENST00000384792 133 ntBASIC5.63□□□□□ -1.51
LIG1P18858 ARSD-AS1-201ENST00000414053 816 ntTSL 2 BASIC5.63□□□□□ -1.51
LIG1P18858 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC5.63□□□□□ -1.51
LIG1P18858 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC5.63□□□□□ -1.51
LIG1P18858 RPL12P3-201ENST00000440080 396 ntBASIC5.63□□□□□ -1.51
LIG1P18858 AC073587.1-201ENST00000447093 876 ntBASIC5.63□□□□□ -1.51
LIG1P18858 AC005297.2-201ENST00000450430 606 ntBASIC5.63□□□□□ -1.51
LIG1P18858 RN7SL826P-201ENST00000479724 288 ntBASIC5.63□□□□□ -1.51
LIG1P18858 AC027575.1-201ENST00000481064 460 ntBASIC5.63□□□□□ -1.51
LIG1P18858 MTCO1P29-201ENST00000496868 288 ntBASIC5.63□□□□□ -1.51
LIG1P18858 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC5.63□□□□□ -1.51
LIG1P18858 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LIG1P18858 RNU4-29P-201ENST00000515943 174 ntBASIC5.63□□□□□ -1.51
LIG1P18858 RN7SKP260-201ENST00000516907 149 ntBASIC5.63□□□□□ -1.51
LIG1P18858 SNORA25.17-201ENST00000517184 124 ntBASIC5.63□□□□□ -1.51
LIG1P18858 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC5.63□□□□□ -1.51
LIG1P18858 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LIG1P18858 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC5.63□□□□□ -1.51
LIG1P18858 AC105224.1-201ENST00000587055 421 ntBASIC5.63□□□□□ -1.51
LIG1P18858 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC5.63□□□□□ -1.51
LIG1P18858 AC093799.2-201ENST00000610062 578 ntBASIC5.63□□□□□ -1.51
LIG1P18858 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.63□□□□□ -1.51
LIG1P18858 AL133216.2-202ENST00000634512 349 ntBASIC5.63□□□□□ -1.51
LIG1P18858 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.63□□□□□ -1.51
LIG1P18858 U2SURP-208ENST00000473835 7276 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIG1P18858 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
LIG1P18858 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
LIG1P18858 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIG1P18858 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIG1P18858 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.62□□□□□ -1.51
LIG1P18858 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.62□□□□□ -1.51
LIG1P18858 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
LIG1P18858 RNA5SP305-201ENST00000362665 119 ntBASIC5.62□□□□□ -1.51
LIG1P18858 RNU6-1279P-201ENST00000383917 103 ntBASIC5.62□□□□□ -1.51
LIG1P18858 AL645733.1-201ENST00000402250 217 ntBASIC5.62□□□□□ -1.51
LIG1P18858 AL024474.1-201ENST00000404655 591 ntBASIC5.62□□□□□ -1.51
LIG1P18858 SNORA11B-201ENST00000408175 129 ntBASIC5.62□□□□□ -1.51
LIG1P18858 AC096632.1-201ENST00000427395 310 ntBASIC5.62□□□□□ -1.51
LIG1P18858 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.62□□□□□ -1.51
LIG1P18858 RPS20P5-201ENST00000434808 360 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 152.8 ms