Protein–RNA interactions for Protein: P13378

HOXD8, Homeobox protein Hox-D8, humanhuman

Predicted RBP Predictions only

Length 290 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD8P13378 AC016397.1-201ENST00000412463 242 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 RPL6P29-201ENST00000414863 865 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXD8P13378 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXD8P13378 AL358176.3-201ENST00000420757 454 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 BX276092.6-201ENST00000430476 250 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 RPL19P16-201ENST00000433839 588 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 BX276092.8-201ENST00000455722 250 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXD8P13378 AC128713.1-201ENST00000471495 306 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 SNRPCP3-201ENST00000474888 476 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXD8P13378 AC009812.2-201ENST00000517657 457 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXD8P13378 AP005902.1-201ENST00000521358 186 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXD8P13378 AC135001.1-201ENST00000544546 283 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXD8P13378 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXD8P13378 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC5.64□□□□□ -1.51
HOXD8P13378 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
HOXD8P13378 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC5.64□□□□□ -1.51
HOXD8P13378 MIR6128-201ENST00000615528 109 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 AL355365.1-201ENST00000616480 294 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 PLCE1P1-201ENST00000622094 305 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 AL445363.3-201ENST00000623080 671 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 AC055839.1-201ENST00000634467 498 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 SPTY2D1-AS1-204ENST00000634992 373 ntAPPRIS P5 TSL 5 BASIC5.64□□□□□ -1.51
HOXD8P13378 UQCRC2P1-201ENST00000417777 1332 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.64□□□□□ -1.51
HOXD8P13378 CLSPN-206ENST00000520551 4010 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXD8P13378 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
HOXD8P13378 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
HOXD8P13378 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC5.64□□□□□ -1.51
HOXD8P13378 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.64□□□□□ -1.51
HOXD8P13378 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD8P13378 AP001284.1-201ENST00000528393 2118 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD8P13378 MUC12-206ENST00000536621 16321 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
HOXD8P13378 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
HOXD8P13378 FP236241.1-201ENST00000623374 7632 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD8P13378 CU633967.1-211ENST00000624444 7628 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD8P13378 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD8P13378 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD8P13378 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD8P13378 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXD8P13378 RNU6-593P-201ENST00000364716 112 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 SNORD115-7-201ENST00000365306 82 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 SNORA2.3-201ENST00000383920 135 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 Y_RNA.574-201ENST00000384766 95 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 AL603908.1-201ENST00000406098 201 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 RN7SKP100-201ENST00000411258 284 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 AC009302.1-201ENST00000417147 390 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 AC018865.2-201ENST00000423631 129 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 RSL24D1P6-201ENST00000426934 401 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 SNAP23P1-201ENST00000433229 246 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 AL451139.1-201ENST00000434718 346 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXD8P13378 AC009963.2-201ENST00000453431 138 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 RN7SL319P-201ENST00000480656 221 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 AF213884.1-201ENST00000488102 463 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXD8P13378 AC110794.1-201ENST00000505816 425 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 AC097473.1-201ENST00000508142 408 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 HIGD1AP13-201ENST00000509878 289 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 RNU6-1016P-201ENST00000516689 94 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 AP001085.1-201ENST00000524441 639 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXD8P13378 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXD8P13378 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC5.63□□□□□ -1.51
HOXD8P13378 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXD8P13378 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXD8P13378 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC5.63□□□□□ -1.51
HOXD8P13378 DUSP12P1-201ENST00000612874 516 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 RNA5SP439-201ENST00000617595 124 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 AL357559.1-201ENST00000622228 274 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.63□□□□□ -1.51
HOXD8P13378 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
HOXD8P13378 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD8P13378 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD8P13378 IGSF11-AS1-201ENST00000477009 1604 ntTSL 2 BASIC5.63□□□□□ -1.51
HOXD8P13378 PAPPA-AS1-201ENST00000445861 2450 ntBASIC5.63□□□□□ -1.51
HOXD8P13378 GABRA2-206ENST00000507460 5812 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
HOXD8P13378 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC5.62□□□□□ -1.51
HOXD8P13378 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD8P13378 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
HOXD8P13378 RNA5SP453-201ENST00000362503 119 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 RNU6-26P-201ENST00000383985 107 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 Y_RNA.455-201ENST00000384230 98 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 Y_RNA.576-201ENST00000384781 102 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 AC013442.1-201ENST00000397347 228 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 AL360182.1-201ENST00000397433 468 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 MIR450B-201ENST00000401182 78 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 AF186996.5-201ENST00000418098 904 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 RPL7P46-201ENST00000425129 740 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 AL590666.1-201ENST00000428641 433 ntTSL 2 BASIC5.62□□□□□ -1.51
HOXD8P13378 FHP1-201ENST00000442741 703 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 AL162388.1-201ENST00000450912 352 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 GAS5-223ENST00000452197 483 ntTSL 3 BASIC5.62□□□□□ -1.51
HOXD8P13378 SUMO1P2-201ENST00000452524 304 ntBASIC5.62□□□□□ -1.51
HOXD8P13378 RPL23AP55-201ENST00000498163 452 ntBASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 127.1 ms