Protein–RNA interactions for Protein: P12111

COL6A3, Collagen alpha-3(VI) chain, humanhuman

Predictions only

Length 3,177 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3P12111 AC123904.3-201ENST00000547218 814 ntBASIC2.14□□□□□ -2.07
COL6A3P12111 DISC1FP1-204ENST00000563681 466 ntTSL 3 BASIC2.14□□□□□ -2.07
COL6A3P12111 CU459211.1-201ENST00000635667 749 ntBASIC2.14□□□□□ -2.07
COL6A3P12111 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC2.14□□□□□ -2.07
COL6A3P12111 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.14□□□□□ -2.07
COL6A3P12111 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.14□□□□□ -2.07
COL6A3P12111 RNA5SP383-201ENST00000362934 120 ntBASIC2.14□□□□□ -2.07
COL6A3P12111 AL627390.1-201ENST00000396055 340 ntBASIC2.14□□□□□ -2.07
COL6A3P12111 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC2.14□□□□□ -2.07
COL6A3P12111 PIGFP3-201ENST00000441918 722 ntBASIC2.14□□□□□ -2.07
COL6A3P12111 DENND6A-AS1-201ENST00000470427 364 ntTSL 2 BASIC2.14□□□□□ -2.07
COL6A3P12111 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC2.14□□□□□ -2.07
COL6A3P12111 AC136443.5-201ENST00000603741 370 ntBASIC2.14□□□□□ -2.07
COL6A3P12111 MIR6766-201ENST00000622641 72 ntBASIC2.14□□□□□ -2.07
COL6A3P12111 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC2.14□□□□□ -2.07
COL6A3P12111 FOXP2-211ENST00000408937 6443 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL6A3P12111 AC006378.2-201ENST00000623178 2476 ntBASIC2.13□□□□□ -2.07
COL6A3P12111 AC108734.3-201ENST00000481241 1165 ntBASIC2.13□□□□□ -2.07
COL6A3P12111 LNCPRESS2-201ENST00000502518 616 ntTSL 5 BASIC2.13□□□□□ -2.07
COL6A3P12111 AC006390.1-201ENST00000508068 283 ntBASIC2.13□□□□□ -2.07
COL6A3P12111 AC100782.1-201ENST00000520778 590 ntTSL 3 BASIC2.13□□□□□ -2.07
COL6A3P12111 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC2.13□□□□□ -2.07
COL6A3P12111 NEBL-202ENST00000377122 9216 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL6A3P12111 TMEM161BP1-201ENST00000457388 1457 ntBASIC2.13□□□□□ -2.07
COL6A3P12111 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL6A3P12111 AC092326.2-201ENST00000624772 1561 ntBASIC2.13□□□□□ -2.07
COL6A3P12111 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL6A3P12111 AC019129.1-201ENST00000403786 261 ntBASIC2.13□□□□□ -2.07
COL6A3P12111 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC2.13□□□□□ -2.07
COL6A3P12111 RPL21P71-201ENST00000465598 459 ntBASIC2.13□□□□□ -2.07
COL6A3P12111 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC2.13□□□□□ -2.07
COL6A3P12111 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.13□□□□□ -2.07
COL6A3P12111 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC2.13□□□□□ -2.07
COL6A3P12111 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC2.13□□□□□ -2.07
COL6A3P12111 AC072062.1-205ENST00000595058 962 ntTSL 3 BASIC2.13□□□□□ -2.07
COL6A3P12111 AL031274.2-201ENST00000599419 203 ntBASIC2.13□□□□□ -2.07
COL6A3P12111 UBE2Q2P2-203ENST00000613592 761 ntBASIC2.13□□□□□ -2.07
COL6A3P12111 AC093591.3-201ENST00000634516 308 ntBASIC2.13□□□□□ -2.07
COL6A3P12111 MIR7153-201ENST00000637758 57 ntBASIC2.13□□□□□ -2.07
COL6A3P12111 AC022336.2-201ENST00000568966 2538 ntBASIC2.13□□□□□ -2.07
COL6A3P12111 MAPK10-373ENST00000641983 6772 ntBASIC2.13□□□□□ -2.07
COL6A3P12111 RBBP8P1-201ENST00000449447 1844 ntBASIC2.13□□□□□ -2.07
COL6A3P12111 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC2.13□□□□□ -2.07
COL6A3P12111 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC2.13□□□□□ -2.07
COL6A3P12111 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.12□□□□□ -2.07
COL6A3P12111 OR5H15-201ENST00000383696 930 ntBASIC2.12□□□□□ -2.07
COL6A3P12111 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.12□□□□□ -2.07
COL6A3P12111 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC2.12□□□□□ -2.07
COL6A3P12111 RPS27P29-201ENST00000463110 252 ntBASIC2.12□□□□□ -2.07
COL6A3P12111 AC011352.3-201ENST00000505162 593 ntBASIC2.12□□□□□ -2.07
COL6A3P12111 RNU6-250P-201ENST00000516958 103 ntBASIC2.12□□□□□ -2.07
COL6A3P12111 AC087441.2-201ENST00000529141 262 ntBASIC2.12□□□□□ -2.07
COL6A3P12111 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC2.12□□□□□ -2.07
COL6A3P12111 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC2.12□□□□□ -2.07
COL6A3P12111 AC008264.2-201ENST00000610193 3731 ntBASIC2.12□□□□□ -2.07
COL6A3P12111 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC2.12□□□□□ -2.07
COL6A3P12111 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.12□□□□□ -2.07
COL6A3P12111 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC2.12□□□□□ -2.07
COL6A3P12111 AL035405.1-201ENST00000400795 710 ntBASIC2.12□□□□□ -2.07
COL6A3P12111 AC013404.1-201ENST00000413068 249 ntBASIC2.12□□□□□ -2.07
COL6A3P12111 AC009237.8-201ENST00000445492 379 ntBASIC2.12□□□□□ -2.07
COL6A3P12111 LINC01332-201ENST00000506612 502 ntTSL 4 BASIC2.12□□□□□ -2.07
COL6A3P12111 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.12□□□□□ -2.07
COL6A3P12111 AC122134.1-201ENST00000565664 1104 ntBASIC2.12□□□□□ -2.07
COL6A3P12111 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC2.12□□□□□ -2.07
COL6A3P12111 AC092650.2-201ENST00000619984 902 ntBASIC2.12□□□□□ -2.07
COL6A3P12111 AC093909.5-201ENST00000621839 1799 ntBASIC2.12□□□□□ -2.07
COL6A3P12111 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL6A3P12111 RNU6-1027P-201ENST00000383998 107 ntBASIC2.12□□□□□ -2.07
COL6A3P12111 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.12□□□□□ -2.07
COL6A3P12111 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.12□□□□□ -2.07
COL6A3P12111 AC106791.1-201ENST00000514616 827 ntTSL 5 BASIC2.12□□□□□ -2.07
COL6A3P12111 AC087362.2-201ENST00000529325 256 ntTSL 3 BASIC2.12□□□□□ -2.07
COL6A3P12111 AL845331.3-202ENST00000562856 261 ntBASIC2.12□□□□□ -2.07
COL6A3P12111 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
COL6A3P12111 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
COL6A3P12111 AC012498.1-201ENST00000424037 437 ntBASIC2.11□□□□□ -2.07
COL6A3P12111 IKZF2-209ENST00000442445 551 ntTSL 5 BASIC2.11□□□□□ -2.07
COL6A3P12111 AC025281.1-201ENST00000567026 265 ntBASIC2.11□□□□□ -2.07
COL6A3P12111 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.11□□□□□ -2.07
COL6A3P12111 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.11□□□□□ -2.07
COL6A3P12111 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC2.11□□□□□ -2.07
COL6A3P12111 AL356277.3-201ENST00000432484 618 ntTSL 3 BASIC2.11□□□□□ -2.07
COL6A3P12111 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC2.11□□□□□ -2.07
COL6A3P12111 AC147055.1-201ENST00000509261 750 ntBASIC2.11□□□□□ -2.07
COL6A3P12111 Y_RNA.681-201ENST00000516445 113 ntBASIC2.11□□□□□ -2.07
COL6A3P12111 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.11□□□□□ -2.07
COL6A3P12111 XRCC4-203ENST00000396027 1530 ntAPPRIS ALT1 TSL 5 BASIC2.11□□□□□ -2.07
COL6A3P12111 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
COL6A3P12111 AL445685.2-201ENST00000422551 342 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 MTCYBP31-201ENST00000438855 1122 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 Z99714.1-201ENST00000450463 807 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC2.1□□□□□ -2.07
COL6A3P12111 RNA5SP76-201ENST00000516277 87 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC2.1□□□□□ -2.07
COL6A3P12111 AC009101.2-201ENST00000564293 456 ntTSL 3 BASIC2.1□□□□□ -2.07
COL6A3P12111 AP006248.2-201ENST00000623309 592 ntBASIC2.1□□□□□ -2.07
COL6A3P12111 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC2.1□□□□□ -2.07
COL6A3P12111 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
COL6A3P12111 MIR21-201ENST00000362134 72 ntBASIC2.1□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 96.4 ms