Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 RNU6-319P-201ENST00000516025 108 ntBASIC2.47□□□□□ -2.01
COL11A1P12107 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.47□□□□□ -2.01
COL11A1P12107 NF1P5-201ENST00000588287 448 ntBASIC2.47□□□□□ -2.01
COL11A1P12107 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.47□□□□□ -2.01
COL11A1P12107 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC2.47□□□□□ -2.01
COL11A1P12107 BNIP3P8-201ENST00000597863 560 ntBASIC2.47□□□□□ -2.01
COL11A1P12107 AC245517.5-201ENST00000611529 162 ntBASIC2.47□□□□□ -2.01
COL11A1P12107 AC107905.1-201ENST00000616204 426 ntBASIC2.47□□□□□ -2.01
COL11A1P12107 VN1R7P-201ENST00000619242 903 ntBASIC2.47□□□□□ -2.01
COL11A1P12107 AC244517.12-201ENST00000623581 663 ntBASIC2.47□□□□□ -2.01
COL11A1P12107 CU459211.1-201ENST00000635667 749 ntBASIC2.47□□□□□ -2.01
COL11A1P12107 AL512643.1-201ENST00000635735 524 ntBASIC2.47□□□□□ -2.01
COL11A1P12107 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.46□□□□□ -2.01
COL11A1P12107 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.46□□□□□ -2.02
COL11A1P12107 DCAF13P1-201ENST00000495256 1330 ntBASIC2.46□□□□□ -2.02
COL11A1P12107 AC091152.2-201ENST00000591628 2569 ntBASIC2.46□□□□□ -2.02
COL11A1P12107 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.46□□□□□ -2.02
COL11A1P12107 MTND4P11-201ENST00000417020 1058 ntBASIC2.46□□□□□ -2.02
COL11A1P12107 AL592045.1-201ENST00000429867 352 ntBASIC2.46□□□□□ -2.02
COL11A1P12107 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC2.46□□□□□ -2.02
COL11A1P12107 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC2.46□□□□□ -2.02
COL11A1P12107 AC091179.1-201ENST00000461606 579 ntBASIC2.46□□□□□ -2.02
COL11A1P12107 RPL23AP42-201ENST00000471152 471 ntBASIC2.46□□□□□ -2.02
COL11A1P12107 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC2.46□□□□□ -2.02
COL11A1P12107 CKS1BP2-201ENST00000497342 240 ntBASIC2.46□□□□□ -2.02
COL11A1P12107 ATG10-AS1-201ENST00000504846 648 ntBASIC2.46□□□□□ -2.02
COL11A1P12107 SNORA48.9-201ENST00000516419 162 ntBASIC2.46□□□□□ -2.02
COL11A1P12107 AP003465.1-201ENST00000520575 382 ntTSL 2 BASIC2.46□□□□□ -2.02
COL11A1P12107 AL358333.1-201ENST00000555115 467 ntTSL 3 BASIC2.46□□□□□ -2.02
COL11A1P12107 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC2.46□□□□□ -2.02
COL11A1P12107 AP004247.3-201ENST00000608682 624 ntBASIC2.46□□□□□ -2.02
COL11A1P12107 C2orf27A-204ENST00000623058 969 ntBASIC2.46□□□□□ -2.02
COL11A1P12107 AC092159.4-201ENST00000624944 550 ntBASIC2.46□□□□□ -2.02
COL11A1P12107 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC2.46□□□□□ -2.02
COL11A1P12107 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC2.45□□□□□ -2.02
COL11A1P12107 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC2.45□□□□□ -2.02
COL11A1P12107 Y_RNA.4-201ENST00000362333 112 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 RPL31P52-201ENST00000407532 367 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 MTCYBP7-201ENST00000419540 1134 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 OR6C72P-201ENST00000451403 892 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.45□□□□□ -2.02
COL11A1P12107 AC021087.2-201ENST00000504656 1203 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 AP001960.1-201ENST00000506494 658 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.45□□□□□ -2.02
COL11A1P12107 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC2.45□□□□□ -2.02
COL11A1P12107 RNU6-551P-201ENST00000516661 103 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 AC008676.3-201ENST00000521237 435 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.45□□□□□ -2.02
COL11A1P12107 ABI1P1-201ENST00000603375 1120 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL11A1P12107 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
COL11A1P12107 SLC9C2-201ENST00000367714 4428 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL11A1P12107 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
COL11A1P12107 AP001148.1-201ENST00000624124 2359 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 Y_RNA.164-201ENST00000363709 102 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 SNORA48.3-201ENST00000391081 134 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 AC048351.1-201ENST00000420064 602 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC2.45□□□□□ -2.02
COL11A1P12107 USP9YP8-201ENST00000441913 500 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 RPL31P53-201ENST00000457065 348 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 HMGB3P30-201ENST00000457863 606 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 RNU7-27P-201ENST00000459281 62 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 SNORD108-201ENST00000459332 71 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 TRBV1-201ENST00000476502 284 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.45□□□□□ -2.02
COL11A1P12107 CFAP44-AS1-202ENST00000498480 686 ntTSL 3 BASIC2.45□□□□□ -2.02
COL11A1P12107 SPINK9-202ENST00000511717 604 ntAPPRIS ALT2 TSL 5 BASIC2.45□□□□□ -2.02
COL11A1P12107 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC2.45□□□□□ -2.02
COL11A1P12107 RNU6-751P-201ENST00000516382 101 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC2.45□□□□□ -2.02
COL11A1P12107 AC012182.1-201ENST00000570133 895 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 MIR3670-2-201ENST00000582974 65 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 MIR3670-1-201ENST00000584160 65 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 MIR3670-3-201ENST00000584855 65 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 AC079791.1-201ENST00000605356 973 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 MIR3670-4-201ENST00000612260 65 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 AC104237.2-201ENST00000612456 443 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 AC010297.1-201ENST00000623948 149 ntBASIC2.45□□□□□ -2.02
COL11A1P12107 AL139811.1-201ENST00000424779 2299 ntBASIC2.44□□□□□ -2.02
COL11A1P12107 WWP1P1-201ENST00000466609 2769 ntBASIC2.44□□□□□ -2.02
COL11A1P12107 LINC01684-201ENST00000415182 2176 ntTSL 1 (best) BASIC2.44□□□□□ -2.02
COL11A1P12107 RNU6-1159P-201ENST00000362933 107 ntBASIC2.44□□□□□ -2.02
COL11A1P12107 SNORA17.3-201ENST00000391159 129 ntBASIC2.44□□□□□ -2.02
COL11A1P12107 RPS3AP26-201ENST00000398259 784 ntBASIC2.44□□□□□ -2.02
COL11A1P12107 RNA5SP498-201ENST00000411342 120 ntBASIC2.44□□□□□ -2.02
COL11A1P12107 AC073310.1-201ENST00000423226 1033 ntBASIC2.44□□□□□ -2.02
COL11A1P12107 TRAPPC2P9-201ENST00000434556 343 ntBASIC2.44□□□□□ -2.02
COL11A1P12107 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.44□□□□□ -2.02
COL11A1P12107 RN7SKP210-201ENST00000459176 261 ntBASIC2.44□□□□□ -2.02
COL11A1P12107 AP001086.1-201ENST00000494882 321 ntBASIC2.44□□□□□ -2.02
COL11A1P12107 OR11H5P-201ENST00000554039 926 ntBASIC2.44□□□□□ -2.02
COL11A1P12107 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC2.44□□□□□ -2.02
COL11A1P12107 XIST_intron.1-201ENST00000619444 68 ntBASIC2.44□□□□□ -2.02
COL11A1P12107 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC2.44□□□□□ -2.02
COL11A1P12107 DEFB127-201ENST00000382388 514 ntAPPRIS P1 TSL 1 (best) BASIC2.43□□□□□ -2.02
COL11A1P12107 CD80-202ENST00000383669 771 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
COL11A1P12107 Y_RNA.595-201ENST00000410403 105 ntBASIC2.43□□□□□ -2.02
COL11A1P12107 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC2.43□□□□□ -2.02
COL11A1P12107 RPL7P52-201ENST00000449200 742 ntBASIC2.43□□□□□ -2.02
COL11A1P12107 AL118520.1-201ENST00000450770 291 ntBASIC2.43□□□□□ -2.02
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms