Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 MTND5P21-201ENST00000531961 522 ntBASIC3.34□□□□□ -1.87
TOP2AP11388 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.34□□□□□ -1.87
TOP2AP11388 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC3.34□□□□□ -1.87
TOP2AP11388 AP001109.1-201ENST00000587114 279 ntTSL 3 BASIC3.34□□□□□ -1.87
TOP2AP11388 BNIP3P8-201ENST00000597863 560 ntBASIC3.34□□□□□ -1.87
TOP2AP11388 AC092447.7-201ENST00000422212 1621 ntBASIC3.34□□□□□ -1.87
TOP2AP11388 LCORL-202ENST00000382224 4984 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
TOP2AP11388 BTBD10P2-201ENST00000404779 676 ntBASIC3.34□□□□□ -1.88
TOP2AP11388 HMGB1P1-201ENST00000522557 636 ntBASIC3.34□□□□□ -1.88
TOP2AP11388 OR5D17P-201ENST00000531492 978 ntBASIC3.34□□□□□ -1.88
TOP2AP11388 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC3.34□□□□□ -1.88
TOP2AP11388 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.34□□□□□ -1.88
TOP2AP11388 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC3.34□□□□□ -1.88
TOP2AP11388 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
TOP2AP11388 AP003117.2-201ENST00000606010 545 ntBASIC3.34□□□□□ -1.88
TOP2AP11388 AL391813.2-201ENST00000609113 322 ntBASIC3.34□□□□□ -1.88
TOP2AP11388 U6.98-201ENST00000637157 84 ntBASIC3.34□□□□□ -1.88
TOP2AP11388 SET-203ENST00000372688 801 ntTSL 2 BASIC3.33□□□□□ -1.88
TOP2AP11388 AC019129.1-201ENST00000403786 261 ntBASIC3.33□□□□□ -1.88
TOP2AP11388 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
TOP2AP11388 AC010723.1-201ENST00000435111 540 ntTSL 3 BASIC3.33□□□□□ -1.88
TOP2AP11388 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.33□□□□□ -1.88
TOP2AP11388 RPL23AP7-203ENST00000449021 469 ntBASIC3.33□□□□□ -1.88
TOP2AP11388 AC091179.1-201ENST00000461606 579 ntBASIC3.33□□□□□ -1.88
TOP2AP11388 AC132942.1-201ENST00000486753 483 ntBASIC3.33□□□□□ -1.88
TOP2AP11388 RNU6-250P-201ENST00000516958 103 ntBASIC3.33□□□□□ -1.88
TOP2AP11388 RNA5SP402-201ENST00000517148 110 ntBASIC3.33□□□□□ -1.88
TOP2AP11388 AC007536.1-201ENST00000533382 349 ntBASIC3.33□□□□□ -1.88
TOP2AP11388 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.33□□□□□ -1.88
TOP2AP11388 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.33□□□□□ -1.88
TOP2AP11388 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
TOP2AP11388 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
TOP2AP11388 RNU6-178P-201ENST00000384631 104 ntBASIC3.32□□□□□ -1.88
TOP2AP11388 MIR1294-201ENST00000408503 142 ntBASIC3.32□□□□□ -1.88
TOP2AP11388 RNA5SP270-201ENST00000411361 118 ntBASIC3.32□□□□□ -1.88
TOP2AP11388 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC3.32□□□□□ -1.88
TOP2AP11388 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC3.32□□□□□ -1.88
TOP2AP11388 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC3.32□□□□□ -1.88
TOP2AP11388 COX6CP5-201ENST00000527162 228 ntBASIC3.32□□□□□ -1.88
TOP2AP11388 AC093012.1-203ENST00000548437 450 ntTSL 2 BASIC3.32□□□□□ -1.88
TOP2AP11388 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.32□□□□□ -1.88
TOP2AP11388 C16orf97-206ENST00000622950 415 ntTSL 2 BASIC3.32□□□□□ -1.88
TOP2AP11388 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.32□□□□□ -1.88
TOP2AP11388 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.31□□□□□ -1.88
TOP2AP11388 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC3.31□□□□□ -1.88
TOP2AP11388 AC126323.6-201ENST00000561701 451 ntTSL 3 BASIC3.31□□□□□ -1.88
TOP2AP11388 C9orf153-205ENST00000617985 333 ntAPPRIS ALT2 TSL 5 BASIC3.31□□□□□ -1.88
TOP2AP11388 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC3.31□□□□□ -1.88
TOP2AP11388 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC3.31□□□□□ -1.88
TOP2AP11388 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.31□□□□□ -1.88
TOP2AP11388 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.31□□□□□ -1.88
TOP2AP11388 IDE-201ENST00000265986 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
TOP2AP11388 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
TOP2AP11388 AC073310.1-201ENST00000423226 1033 ntBASIC3.3□□□□□ -1.88
TOP2AP11388 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC3.3□□□□□ -1.88
TOP2AP11388 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC3.3□□□□□ -1.88
TOP2AP11388 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.3□□□□□ -1.88
TOP2AP11388 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC3.3□□□□□ -1.88
TOP2AP11388 AC009314.1-201ENST00000603871 304 ntBASIC3.3□□□□□ -1.88
TOP2AP11388 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.3□□□□□ -1.88
TOP2AP11388 VIS1.1-201ENST00000610517 203 ntBASIC3.3□□□□□ -1.88
TOP2AP11388 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC3.3□□□□□ -1.88
TOP2AP11388 CFHR4-202ENST00000367416 2178 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
TOP2AP11388 ZNF720P1-201ENST00000562403 1939 ntBASIC3.29□□□□□ -1.88
TOP2AP11388 U8.9-201ENST00000365667 134 ntBASIC3.29□□□□□ -1.88
TOP2AP11388 LINC01510-201ENST00000441991 468 ntTSL 3 BASIC3.29□□□□□ -1.88
TOP2AP11388 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC3.29□□□□□ -1.88
TOP2AP11388 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC3.29□□□□□ -1.88
TOP2AP11388 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC3.29□□□□□ -1.88
TOP2AP11388 IGHV3-76-201ENST00000522465 295 ntBASIC3.29□□□□□ -1.88
TOP2AP11388 AC080128.1-201ENST00000474389 1917 ntBASIC3.29□□□□□ -1.88
TOP2AP11388 RNU6-14P-201ENST00000384630 106 ntBASIC3.29□□□□□ -1.88
TOP2AP11388 RNA5SP181-201ENST00000410246 98 ntBASIC3.29□□□□□ -1.88
TOP2AP11388 AC027124.2-201ENST00000428249 105 ntBASIC3.29□□□□□ -1.88
TOP2AP11388 AC104332.2-201ENST00000429959 156 ntBASIC3.29□□□□□ -1.88
TOP2AP11388 MTCYBP14-201ENST00000457471 715 ntBASIC3.29□□□□□ -1.88
TOP2AP11388 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.29□□□□□ -1.88
TOP2AP11388 AL627309.6-201ENST00000606857 840 ntBASIC3.29□□□□□ -1.88
TOP2AP11388 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
TOP2AP11388 DENND4A-209ENST00000635620 5887 ntTSL 5 BASIC3.28□□□□□ -1.88
TOP2AP11388 MTND5P7-201ENST00000413558 1798 ntBASIC3.28□□□□□ -1.88
TOP2AP11388 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
TOP2AP11388 RNA5SP160-201ENST00000364866 120 ntBASIC3.28□□□□□ -1.88
TOP2AP11388 MTCYBP31-201ENST00000438855 1122 ntBASIC3.28□□□□□ -1.88
TOP2AP11388 RPL23AP76-201ENST00000441860 458 ntBASIC3.28□□□□□ -1.88
TOP2AP11388 NAMPTP2-201ENST00000505629 1115 ntBASIC3.28□□□□□ -1.88
TOP2AP11388 TMEM248P1-201ENST00000510579 951 ntBASIC3.28□□□□□ -1.88
TOP2AP11388 RNU6ATAC12P-201ENST00000516542 115 ntBASIC3.28□□□□□ -1.88
TOP2AP11388 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC3.28□□□□□ -1.88
TOP2AP11388 MIR4303-201ENST00000581299 66 ntBASIC3.28□□□□□ -1.88
TOP2AP11388 SNORA50A-202ENST00000629536 136 ntBASIC3.28□□□□□ -1.88
TOP2AP11388 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC3.27□□□□□ -1.89
TOP2AP11388 RNU4-62P-201ENST00000410125 130 ntBASIC3.27□□□□□ -1.89
TOP2AP11388 UBE2V2P4-201ENST00000447495 259 ntBASIC3.27□□□□□ -1.89
TOP2AP11388 AC011352.3-201ENST00000505162 593 ntBASIC3.27□□□□□ -1.89
TOP2AP11388 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.27□□□□□ -1.89
TOP2AP11388 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC3.27□□□□□ -1.89
TOP2AP11388 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.27□□□□□ -1.89
TOP2AP11388 AC068025.2-201ENST00000584958 419 ntTSL 5 BASIC3.27□□□□□ -1.89
TOP2AP11388 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 109.6 ms