Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.02□□□□□ -1.93
TPM1P09493 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TPM1P09493 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.02□□□□□ -1.93
TPM1P09493 AC009237.2-201ENST00000421358 284 ntBASIC3.02□□□□□ -1.93
TPM1P09493 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC3.02□□□□□ -1.93
TPM1P09493 AC233981.1-201ENST00000423224 461 ntBASIC3.02□□□□□ -1.93
TPM1P09493 TMEM167AP1-201ENST00000423409 219 ntBASIC3.02□□□□□ -1.93
TPM1P09493 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC3.02□□□□□ -1.93
TPM1P09493 GCA-203ENST00000429691 824 ntTSL 3 BASIC3.02□□□□□ -1.93
TPM1P09493 AL590762.3-201ENST00000436372 640 ntBASIC3.02□□□□□ -1.93
TPM1P09493 RPL23AP74-201ENST00000437246 471 ntBASIC3.02□□□□□ -1.93
TPM1P09493 PRDX3P3-201ENST00000447765 522 ntBASIC3.02□□□□□ -1.93
TPM1P09493 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC3.02□□□□□ -1.93
TPM1P09493 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC3.02□□□□□ -1.93
TPM1P09493 RPS20P24-201ENST00000457473 361 ntBASIC3.02□□□□□ -1.93
TPM1P09493 RN7SL807P-201ENST00000470923 297 ntBASIC3.02□□□□□ -1.93
TPM1P09493 VPS26AP1-201ENST00000483197 979 ntBASIC3.02□□□□□ -1.93
TPM1P09493 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.02□□□□□ -1.93
TPM1P09493 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC3.02□□□□□ -1.93
TPM1P09493 RAC1P5-201ENST00000512182 576 ntBASIC3.02□□□□□ -1.93
TPM1P09493 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.02□□□□□ -1.93
TPM1P09493 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.02□□□□□ -1.93
TPM1P09493 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC3.02□□□□□ -1.93
TPM1P09493 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.02□□□□□ -1.93
TPM1P09493 MED28P6-201ENST00000558776 231 ntBASIC3.02□□□□□ -1.93
TPM1P09493 RPL23AP78-201ENST00000599928 470 ntBASIC3.02□□□□□ -1.93
TPM1P09493 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.02□□□□□ -1.93
TPM1P09493 U73023.1-201ENST00000603134 700 ntBASIC3.02□□□□□ -1.93
TPM1P09493 AC012669.1-201ENST00000603209 283 ntBASIC3.02□□□□□ -1.93
TPM1P09493 AL355802.4-201ENST00000607635 548 ntBASIC3.02□□□□□ -1.93
TPM1P09493 AL353748.2-201ENST00000622148 471 ntBASIC3.02□□□□□ -1.93
TPM1P09493 AC098679.5-201ENST00000624394 571 ntBASIC3.02□□□□□ -1.93
TPM1P09493 ZNF732-202ENST00000619749 2179 ntAPPRIS ALT2 TSL 2 BASIC3.02□□□□□ -1.93
TPM1P09493 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
TPM1P09493 RNA5SP267-201ENST00000364893 126 ntBASIC3.01□□□□□ -1.93
TPM1P09493 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.01□□□□□ -1.93
TPM1P09493 RPS20P25-201ENST00000412447 352 ntBASIC3.01□□□□□ -1.93
TPM1P09493 TATDN1P1-201ENST00000414123 891 ntBASIC3.01□□□□□ -1.93
TPM1P09493 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC3.01□□□□□ -1.93
TPM1P09493 ARL2BPP3-201ENST00000421226 480 ntBASIC3.01□□□□□ -1.93
TPM1P09493 AL158156.1-201ENST00000422509 473 ntBASIC3.01□□□□□ -1.93
TPM1P09493 MTCO1P39-201ENST00000426148 480 ntBASIC3.01□□□□□ -1.93
TPM1P09493 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.01□□□□□ -1.93
TPM1P09493 AL512658.1-202ENST00000433486 400 ntTSL 3 BASIC3.01□□□□□ -1.93
TPM1P09493 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.01□□□□□ -1.93
TPM1P09493 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC3.01□□□□□ -1.93
TPM1P09493 OR6K5P-201ENST00000447050 945 ntBASIC3.01□□□□□ -1.93
TPM1P09493 AC009961.3-201ENST00000449832 765 ntBASIC3.01□□□□□ -1.93
TPM1P09493 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC3.01□□□□□ -1.93
TPM1P09493 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.01□□□□□ -1.93
TPM1P09493 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.01□□□□□ -1.93
TPM1P09493 RNU6-551P-201ENST00000516661 103 ntBASIC3.01□□□□□ -1.93
TPM1P09493 AL138812.1-201ENST00000525573 471 ntTSL 3 BASIC3.01□□□□□ -1.93
TPM1P09493 AP000790.1-201ENST00000528891 737 ntBASIC3.01□□□□□ -1.93
TPM1P09493 AC090985.1-201ENST00000554440 480 ntTSL 2 BASIC3.01□□□□□ -1.93
TPM1P09493 LINC00911-201ENST00000555272 546 ntTSL 2 BASIC3.01□□□□□ -1.93
TPM1P09493 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC3.01□□□□□ -1.93
TPM1P09493 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.01□□□□□ -1.93
TPM1P09493 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.01□□□□□ -1.93
TPM1P09493 SACS-201ENST00000382292 15324 ntAPPRIS P1 TSL 5 BASIC3.01□□□□□ -1.93
TPM1P09493 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
TPM1P09493 RNA5SP72-201ENST00000364442 117 ntBASIC3□□□□□ -1.93
TPM1P09493 AC066595.1-201ENST00000426697 399 ntTSL 3 BASIC3□□□□□ -1.93
TPM1P09493 AL590623.1-201ENST00000427864 105 ntBASIC3□□□□□ -1.93
TPM1P09493 AC093422.3-201ENST00000428506 305 ntBASIC3□□□□□ -1.93
TPM1P09493 AC092598.1-201ENST00000431708 797 ntTSL 3 BASIC3□□□□□ -1.93
TPM1P09493 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC3□□□□□ -1.93
TPM1P09493 RPL37P4-201ENST00000448908 268 ntBASIC3□□□□□ -1.93
TPM1P09493 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3□□□□□ -1.93
TPM1P09493 AC234775.1-201ENST00000454247 670 ntBASIC3□□□□□ -1.93
TPM1P09493 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC3□□□□□ -1.93
TPM1P09493 CABYRP1-201ENST00000465493 1045 ntBASIC3□□□□□ -1.93
TPM1P09493 RN7SL504P-201ENST00000494496 287 ntBASIC3□□□□□ -1.93
TPM1P09493 MTND3P24-201ENST00000506306 329 ntBASIC3□□□□□ -1.93
TPM1P09493 SEM1P1-201ENST00000506694 209 ntBASIC3□□□□□ -1.93
TPM1P09493 SAP18P1-201ENST00000512058 390 ntBASIC3□□□□□ -1.93
TPM1P09493 AC091826.1-201ENST00000514065 313 ntBASIC3□□□□□ -1.93
TPM1P09493 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC3□□□□□ -1.93
TPM1P09493 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3□□□□□ -1.93
TPM1P09493 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC3□□□□□ -1.93
TPM1P09493 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC3□□□□□ -1.93
TPM1P09493 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC3□□□□□ -1.93
TPM1P09493 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3□□□□□ -1.93
TPM1P09493 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC3□□□□□ -1.93
TPM1P09493 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3□□□□□ -1.93
TPM1P09493 AC010620.2-201ENST00000600135 313 ntBASIC3□□□□□ -1.93
TPM1P09493 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3□□□□□ -1.93
TPM1P09493 AL160237.3-201ENST00000604114 1013 ntBASIC3□□□□□ -1.93
TPM1P09493 AC007563.2-202ENST00000607591 394 ntTSL 3 BASIC3□□□□□ -1.93
TPM1P09493 AC073569.3-201ENST00000619055 682 ntBASIC3□□□□□ -1.93
TPM1P09493 MAPK10-266ENST00000641066 6555 ntBASIC3□□□□□ -1.93
TPM1P09493 MTND5P11-201ENST00000511037 1812 ntBASIC3□□□□□ -1.93
TPM1P09493 MTCO1P6-201ENST00000481192 1384 ntBASIC3□□□□□ -1.93
TPM1P09493 FAM214A-204ENST00000546305 3697 ntTSL 2 BASIC2.99□□□□□ -1.93
TPM1P09493 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.99□□□□□ -1.93
TPM1P09493 SNORA38.1-201ENST00000364172 131 ntBASIC2.99□□□□□ -1.93
TPM1P09493 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC2.99□□□□□ -1.93
TPM1P09493 AL137014.1-201ENST00000420490 1226 ntBASIC2.99□□□□□ -1.93
TPM1P09493 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.99□□□□□ -1.93
TPM1P09493 NIPA2P1-201ENST00000426223 976 ntBASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms