Protein–RNA interactions for Protein: P08254

MMP3, Stromelysin-1, humanhuman

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP3P08254 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC4.06□□□□□ -1.76
MMP3P08254 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MMP3P08254 MTCO1P23-201ENST00000415223 1526 ntBASIC4.06□□□□□ -1.76
MMP3P08254 ZNF92-204ENST00000450302 2957 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MMP3P08254 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
MMP3P08254 ELL2P4-201ENST00000446870 1376 ntBASIC4.06□□□□□ -1.76
MMP3P08254 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.06□□□□□ -1.76
MMP3P08254 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MMP3P08254 RNU5F-6P-201ENST00000362979 116 ntBASIC4.06□□□□□ -1.76
MMP3P08254 Y_RNA.359-201ENST00000365498 102 ntBASIC4.06□□□□□ -1.76
MMP3P08254 HLFP1-201ENST00000402375 499 ntBASIC4.06□□□□□ -1.76
MMP3P08254 AC109780.2-201ENST00000413467 845 ntBASIC4.06□□□□□ -1.76
MMP3P08254 AC083875.1-201ENST00000419509 405 ntBASIC4.06□□□□□ -1.76
MMP3P08254 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.06□□□□□ -1.76
MMP3P08254 AL035410.1-201ENST00000427409 427 ntBASIC4.06□□□□□ -1.76
MMP3P08254 AL365184.2-201ENST00000431139 435 ntBASIC4.06□□□□□ -1.76
MMP3P08254 ATP5JP1-201ENST00000431631 322 ntBASIC4.06□□□□□ -1.76
MMP3P08254 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.06□□□□□ -1.76
MMP3P08254 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.06□□□□□ -1.76
MMP3P08254 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC4.06□□□□□ -1.76
MMP3P08254 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC4.06□□□□□ -1.76
MMP3P08254 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC4.06□□□□□ -1.76
MMP3P08254 COX6CP2-201ENST00000444980 225 ntBASIC4.06□□□□□ -1.76
MMP3P08254 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MMP3P08254 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC4.06□□□□□ -1.76
MMP3P08254 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.06□□□□□ -1.76
MMP3P08254 RBMY2UP-201ENST00000453474 324 ntBASIC4.06□□□□□ -1.76
MMP3P08254 AC098824.1-201ENST00000453565 980 ntBASIC4.06□□□□□ -1.76
MMP3P08254 AC026410.2-201ENST00000460281 156 ntBASIC4.06□□□□□ -1.76
MMP3P08254 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC4.06□□□□□ -1.76
MMP3P08254 TRBV12-2-201ENST00000489763 344 ntBASIC4.06□□□□□ -1.76
MMP3P08254 GYPA-209ENST00000512789 258 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MMP3P08254 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC4.06□□□□□ -1.76
MMP3P08254 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.06□□□□□ -1.76
MMP3P08254 SUMO2P20-201ENST00000520803 283 ntBASIC4.06□□□□□ -1.76
MMP3P08254 AC090281.1-201ENST00000523019 276 ntBASIC4.06□□□□□ -1.76
MMP3P08254 AC100763.1-201ENST00000532735 522 ntTSL 3 BASIC4.06□□□□□ -1.76
MMP3P08254 NACA-211ENST00000548563 827 ntTSL 5 BASIC4.06□□□□□ -1.76
MMP3P08254 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.06□□□□□ -1.76
MMP3P08254 AC136618.2-201ENST00000575091 400 ntBASIC4.06□□□□□ -1.76
MMP3P08254 AP001004.1-201ENST00000582468 324 ntBASIC4.06□□□□□ -1.76
MMP3P08254 AC006116.10-201ENST00000591836 581 ntBASIC4.06□□□□□ -1.76
MMP3P08254 RNU6-88P-201ENST00000606801 100 ntBASIC4.06□□□□□ -1.76
MMP3P08254 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC4.06□□□□□ -1.76
MMP3P08254 CT45A5-202ENST00000617203 726 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
MMP3P08254 ABBA01000935.2-201ENST00000637477 838 ntBASIC4.06□□□□□ -1.76
MMP3P08254 FOXP2-227ENST00000638397 240 ntTSL 5 BASIC4.06□□□□□ -1.76
MMP3P08254 KLHL13-208ENST00000541812 3102 ntTSL 2 BASIC4.06□□□□□ -1.76
MMP3P08254 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC4.06□□□□□ -1.76
MMP3P08254 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.06□□□□□ -1.76
MMP3P08254 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC4.06□□□□□ -1.76
MMP3P08254 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.06□□□□□ -1.76
MMP3P08254 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC4.06□□□□□ -1.76
MMP3P08254 MTND5P28-201ENST00000438005 1594 ntBASIC4.06□□□□□ -1.76
MMP3P08254 CCDC68-201ENST00000337363 1457 ntAPPRIS P1 TSL 2 BASIC4.05□□□□□ -1.76
MMP3P08254 AL022578.1-201ENST00000439330 1433 ntBASIC4.05□□□□□ -1.76
MMP3P08254 AC020637.1-201ENST00000546977 1447 ntTSL 5 BASIC4.05□□□□□ -1.76
MMP3P08254 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.05□□□□□ -1.76
MMP3P08254 PLCL2-202ENST00000432376 3940 ntAPPRIS P3 TSL 1 (best) BASIC4.05□□□□□ -1.76
MMP3P08254 RNU6-462P-201ENST00000362659 105 ntBASIC4.05□□□□□ -1.76
MMP3P08254 RNU6-501P-201ENST00000364072 100 ntBASIC4.05□□□□□ -1.76
MMP3P08254 AL355379.1-201ENST00000405542 640 ntBASIC4.05□□□□□ -1.76
MMP3P08254 AL133384.1-201ENST00000412744 351 ntBASIC4.05□□□□□ -1.76
MMP3P08254 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.05□□□□□ -1.76
MMP3P08254 AL158156.1-201ENST00000422509 473 ntBASIC4.05□□□□□ -1.76
MMP3P08254 RPL30P3-201ENST00000424262 333 ntBASIC4.05□□□□□ -1.76
MMP3P08254 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC4.05□□□□□ -1.76
MMP3P08254 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC4.05□□□□□ -1.76
MMP3P08254 MTCO3P5-201ENST00000433620 714 ntBASIC4.05□□□□□ -1.76
MMP3P08254 LSM1P1-201ENST00000438629 273 ntBASIC4.05□□□□□ -1.76
MMP3P08254 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC4.05□□□□□ -1.76
MMP3P08254 AC087385.1-201ENST00000475062 312 ntBASIC4.05□□□□□ -1.76
MMP3P08254 AC017015.1-201ENST00000477387 286 ntBASIC4.05□□□□□ -1.76
MMP3P08254 AC116337.2-201ENST00000477662 156 ntBASIC4.05□□□□□ -1.76
MMP3P08254 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.05□□□□□ -1.76
MMP3P08254 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC4.05□□□□□ -1.76
MMP3P08254 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.05□□□□□ -1.76
MMP3P08254 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC4.05□□□□□ -1.76
MMP3P08254 AC013828.2-201ENST00000532487 235 ntBASIC4.05□□□□□ -1.76
MMP3P08254 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC4.05□□□□□ -1.76
MMP3P08254 RPL21P12-201ENST00000559810 515 ntBASIC4.05□□□□□ -1.76
MMP3P08254 ABBA01006766.1-201ENST00000584728 294 ntBASIC4.05□□□□□ -1.76
MMP3P08254 BNIP3P23-201ENST00000599655 511 ntBASIC4.05□□□□□ -1.76
MMP3P08254 YWHAQP7-201ENST00000603536 658 ntBASIC4.05□□□□□ -1.76
MMP3P08254 AL139286.1-201ENST00000604465 483 ntBASIC4.05□□□□□ -1.76
MMP3P08254 AC010678.1-201ENST00000614118 713 ntBASIC4.05□□□□□ -1.76
MMP3P08254 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC4.05□□□□□ -1.76
MMP3P08254 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.05□□□□□ -1.76
MMP3P08254 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MMP3P08254 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.05□□□□□ -1.76
MMP3P08254 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MMP3P08254 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC4.05□□□□□ -1.76
MMP3P08254 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC4.05□□□□□ -1.76
MMP3P08254 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC4.05□□□□□ -1.76
MMP3P08254 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC4.04□□□□□ -1.76
MMP3P08254 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC4.04□□□□□ -1.76
MMP3P08254 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC4.04□□□□□ -1.76
MMP3P08254 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC4.04□□□□□ -1.76
MMP3P08254 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC4.04□□□□□ -1.76
MMP3P08254 GDI2P1-201ENST00000429312 1336 ntBASIC4.04□□□□□ -1.76
Retrieved 100 of 98,524 protein–RNA pairs in 326 ms