Protein–RNA interactions for Protein: P07949

RET, Proto-oncogene tyrosine-protein kinase receptor Ret, humanhuman

Predictions only

Length 1,114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETP07949 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
RETP07949 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC3.08□□□□□ -1.92
RETP07949 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
RETP07949 SAGE4P-201ENST00000442271 3381 ntBASIC3.08□□□□□ -1.92
RETP07949 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RETP07949 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RETP07949 KNL1-202ENST00000399668 7607 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
RETP07949 MIR22-201ENST00000362190 85 ntBASIC3.07□□□□□ -1.92
RETP07949 DEFB109C-201ENST00000382575 264 ntBASIC3.07□□□□□ -1.92
RETP07949 DEFB109B-201ENST00000382656 264 ntBASIC3.07□□□□□ -1.92
RETP07949 RNU4-65P-201ENST00000410473 140 ntBASIC3.07□□□□□ -1.92
RETP07949 AC246680.2-201ENST00000422106 389 ntBASIC3.07□□□□□ -1.92
RETP07949 AC063976.3-201ENST00000426849 329 ntBASIC3.07□□□□□ -1.92
RETP07949 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.07□□□□□ -1.92
RETP07949 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.07□□□□□ -1.92
RETP07949 AC010105.1-201ENST00000437290 385 ntTSL 5 BASIC3.07□□□□□ -1.92
RETP07949 ZNF736P1Y-201ENST00000440402 1276 ntBASIC3.07□□□□□ -1.92
RETP07949 RPL7P36-201ENST00000444633 681 ntBASIC3.07□□□□□ -1.92
RETP07949 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RETP07949 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.07□□□□□ -1.92
RETP07949 AL109933.2-201ENST00000452651 260 ntBASIC3.07□□□□□ -1.92
RETP07949 AL049548.1-201ENST00000458194 385 ntTSL 2 BASIC3.07□□□□□ -1.92
RETP07949 PRDX3P4-201ENST00000470828 747 ntBASIC3.07□□□□□ -1.92
RETP07949 RPL21P47-201ENST00000483696 477 ntBASIC3.07□□□□□ -1.92
RETP07949 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.07□□□□□ -1.92
RETP07949 RPS27P23-201ENST00000487608 251 ntBASIC3.07□□□□□ -1.92
RETP07949 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.07□□□□□ -1.92
RETP07949 LINC02270-201ENST00000505386 610 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
RETP07949 KLHL2P1-201ENST00000508691 521 ntBASIC3.07□□□□□ -1.92
RETP07949 AC114781.4-201ENST00000513707 639 ntBASIC3.07□□□□□ -1.92
RETP07949 RN7SKP132-201ENST00000516001 208 ntBASIC3.07□□□□□ -1.92
RETP07949 AHI1-217ENST00000534469 680 ntTSL 3 BASIC3.07□□□□□ -1.92
RETP07949 SERPINE4P-201ENST00000554978 281 ntBASIC3.07□□□□□ -1.92
RETP07949 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC3.07□□□□□ -1.92
RETP07949 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC3.07□□□□□ -1.92
RETP07949 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC3.07□□□□□ -1.92
RETP07949 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.07□□□□□ -1.92
RETP07949 AC023824.3-201ENST00000569003 562 ntBASIC3.07□□□□□ -1.92
RETP07949 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC3.07□□□□□ -1.92
RETP07949 MIR4504-201ENST00000577413 92 ntBASIC3.07□□□□□ -1.92
RETP07949 AC138761.3-201ENST00000579993 334 ntBASIC3.07□□□□□ -1.92
RETP07949 BDH2P1-201ENST00000602288 736 ntBASIC3.07□□□□□ -1.92
RETP07949 KC877982.1-201ENST00000602313 470 ntBASIC3.07□□□□□ -1.92
RETP07949 PRELID3BP8-201ENST00000604148 295 ntBASIC3.07□□□□□ -1.92
RETP07949 BNIP3P4-201ENST00000604946 565 ntBASIC3.07□□□□□ -1.92
RETP07949 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.07□□□□□ -1.92
RETP07949 AL627309.6-201ENST00000606857 840 ntBASIC3.07□□□□□ -1.92
RETP07949 ST7-OT4_1.1-201ENST00000615322 200 ntBASIC3.07□□□□□ -1.92
RETP07949 AC068831.7-201ENST00000616954 363 ntBASIC3.07□□□□□ -1.92
RETP07949 AC007405.1-203ENST00000623667 932 ntTSL 5 BASIC3.07□□□□□ -1.92
RETP07949 AC091903.1-201ENST00000624322 454 ntBASIC3.07□□□□□ -1.92
RETP07949 AL109659.3-201ENST00000624985 950 ntBASIC3.07□□□□□ -1.92
RETP07949 AC092608.3-201ENST00000625017 386 ntBASIC3.07□□□□□ -1.92
RETP07949 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RETP07949 CDK1-201ENST00000316629 1733 ntTSL 5 BASIC3.07□□□□□ -1.92
RETP07949 MTND5P24-201ENST00000438892 1767 ntBASIC3.07□□□□□ -1.92
RETP07949 C6orf10-202ENST00000375015 2173 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
RETP07949 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
RETP07949 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.06□□□□□ -1.92
RETP07949 OR56A5-201ENST00000340110 738 ntBASIC3.06□□□□□ -1.92
RETP07949 SNORA63.3-201ENST00000362682 132 ntBASIC3.06□□□□□ -1.92
RETP07949 RNU6-1243P-201ENST00000364028 107 ntBASIC3.06□□□□□ -1.92
RETP07949 SNORA46-201ENST00000384762 135 ntBASIC3.06□□□□□ -1.92
RETP07949 DSTNP4-201ENST00000399472 474 ntBASIC3.06□□□□□ -1.92
RETP07949 RSL24D1P4-201ENST00000400938 484 ntBASIC3.06□□□□□ -1.92
RETP07949 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
RETP07949 AC109780.2-201ENST00000413467 845 ntBASIC3.06□□□□□ -1.92
RETP07949 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.06□□□□□ -1.92
RETP07949 MRPL50P2-201ENST00000416821 482 ntBASIC3.06□□□□□ -1.92
RETP07949 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.06□□□□□ -1.92
RETP07949 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.06□□□□□ -1.92
RETP07949 LAMTOR3P1-201ENST00000428620 370 ntBASIC3.06□□□□□ -1.92
RETP07949 DIAPH3-AS1-203ENST00000435636 467 ntTSL 2 BASIC3.06□□□□□ -1.92
RETP07949 AC099063.1-201ENST00000437128 324 ntTSL 5 BASIC3.06□□□□□ -1.92
RETP07949 AC092170.1-201ENST00000440211 356 ntBASIC3.06□□□□□ -1.92
RETP07949 AL096803.2-201ENST00000450032 677 ntBASIC3.06□□□□□ -1.92
RETP07949 AC108938.1-201ENST00000451204 136 ntBASIC3.06□□□□□ -1.92
RETP07949 LINC00692-201ENST00000451284 932 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RETP07949 UQCRHP3-201ENST00000451503 251 ntBASIC3.06□□□□□ -1.92
RETP07949 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
RETP07949 AC092902.1-201ENST00000486999 259 ntBASIC3.06□□□□□ -1.92
RETP07949 AC104629.1-201ENST00000494226 508 ntBASIC3.06□□□□□ -1.92
RETP07949 ZCCHC10-207ENST00000509437 1070 ntAPPRIS ALT2 TSL 1 (best) BASIC3.06□□□□□ -1.92
RETP07949 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
RETP07949 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.06□□□□□ -1.92
RETP07949 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.06□□□□□ -1.92
RETP07949 RNA5SP468-201ENST00000516782 93 ntBASIC3.06□□□□□ -1.92
RETP07949 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC3.06□□□□□ -1.92
RETP07949 CHCHD7-209ENST00000519367 442 ntTSL 3 BASIC3.06□□□□□ -1.92
RETP07949 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC3.06□□□□□ -1.92
RETP07949 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.06□□□□□ -1.92
RETP07949 AP003717.3-201ENST00000544832 1180 ntBASIC3.06□□□□□ -1.92
RETP07949 AL162311.1-201ENST00000553046 601 ntTSL 3 BASIC3.06□□□□□ -1.92
RETP07949 SNORD84-203ENST00000584275 78 ntBASIC3.06□□□□□ -1.92
RETP07949 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.06□□□□□ -1.92
RETP07949 VN1R90P-201ENST00000595717 726 ntBASIC3.06□□□□□ -1.92
RETP07949 MTATP6P2-201ENST00000603319 678 ntBASIC3.06□□□□□ -1.92
RETP07949 AL035413.2-201ENST00000604801 525 ntBASIC3.06□□□□□ -1.92
RETP07949 HSPE1P14-201ENST00000605812 302 ntBASIC3.06□□□□□ -1.92
RETP07949 AC231759.1-201ENST00000616455 597 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 145.7 ms