Protein–RNA interactions for Protein: P04114

APOB, Apolipoprotein B-100, humanhuman

Known RBP Predictions only

Length 4,563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOBP04114 SNRPGP19-201ENST00000603826 189 ntBASIC1.26□□□□□ -2.21
APOBP04114 AL596220.1-201ENST00000622121 542 ntTSL 4 BASIC1.26□□□□□ -2.21
APOBP04114 DCAF13P1-201ENST00000495256 1330 ntBASIC1.26□□□□□ -2.21
APOBP04114 AP000275.1-201ENST00000411943 390 ntBASIC1.26□□□□□ -2.21
APOBP04114 SAR1AP4-201ENST00000429225 591 ntBASIC1.26□□□□□ -2.21
APOBP04114 AC090543.1-201ENST00000492168 485 ntBASIC1.26□□□□□ -2.21
APOBP04114 C1GALT1P1-201ENST00000548895 1089 ntBASIC1.26□□□□□ -2.21
APOBP04114 AC027458.1-201ENST00000563639 613 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
APOBP04114 TPMTP1-201ENST00000592307 737 ntBASIC1.26□□□□□ -2.21
APOBP04114 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
APOBP04114 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC1.26□□□□□ -2.21
APOBP04114 UHRF1BP1L-203ENST00000545232 4088 ntTSL 1 (best) BASIC1.25□□□□□ -2.21
APOBP04114 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
APOBP04114 AL512430.2-201ENST00000406786 339 ntBASIC1.25□□□□□ -2.21
APOBP04114 AC009237.2-201ENST00000421358 284 ntBASIC1.25□□□□□ -2.21
APOBP04114 NDUFB4P9-201ENST00000511646 388 ntBASIC1.25□□□□□ -2.21
APOBP04114 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC1.25□□□□□ -2.21
APOBP04114 MIR449C-201ENST00000516047 92 ntBASIC1.25□□□□□ -2.21
APOBP04114 RN7SKP49-201ENST00000516675 260 ntBASIC1.25□□□□□ -2.21
APOBP04114 RNA5SP490-201ENST00000517141 136 ntBASIC1.25□□□□□ -2.21
APOBP04114 OR4R2P-201ENST00000530815 597 ntBASIC1.25□□□□□ -2.21
APOBP04114 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC1.25□□□□□ -2.21
APOBP04114 AL845331.3-202ENST00000562856 261 ntBASIC1.25□□□□□ -2.21
APOBP04114 UNC13C-201ENST00000260323 12946 ntAPPRIS P1 TSL 5 BASIC1.25□□□□□ -2.21
APOBP04114 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
APOBP04114 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
APOBP04114 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC1.25□□□□□ -2.21
APOBP04114 RNU6-582P-201ENST00000362989 107 ntBASIC1.25□□□□□ -2.21
APOBP04114 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.25□□□□□ -2.21
APOBP04114 DEFA7P-201ENST00000382676 285 ntBASIC1.25□□□□□ -2.21
APOBP04114 AL021407.1-201ENST00000404531 386 ntBASIC1.25□□□□□ -2.21
APOBP04114 AC093157.1-203ENST00000416329 713 ntTSL 5 BASIC1.25□□□□□ -2.21
APOBP04114 AL731684.2-201ENST00000426839 333 ntTSL 5 BASIC1.25□□□□□ -2.21
APOBP04114 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.25□□□□□ -2.21
APOBP04114 AC017007.3-201ENST00000479865 435 ntBASIC1.25□□□□□ -2.21
APOBP04114 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC1.25□□□□□ -2.21
APOBP04114 AC067805.1-201ENST00000559344 470 ntBASIC1.25□□□□□ -2.21
APOBP04114 AC087468.1-201ENST00000604365 630 ntBASIC1.25□□□□□ -2.21
APOBP04114 AC007620.3-201ENST00000608131 497 ntBASIC1.25□□□□□ -2.21
APOBP04114 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC1.25□□□□□ -2.21
APOBP04114 AL391813.2-201ENST00000609113 322 ntBASIC1.25□□□□□ -2.21
APOBP04114 MUC15-202ENST00000436318 3118 ntTSL 5 BASIC1.25□□□□□ -2.21
APOBP04114 AC009501.3-201ENST00000605001 1352 ntBASIC1.25□□□□□ -2.21
APOBP04114 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
APOBP04114 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC1.25□□□□□ -2.21
APOBP04114 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.25□□□□□ -2.21
APOBP04114 AC092798.1-201ENST00000458542 409 ntBASIC1.25□□□□□ -2.21
APOBP04114 AL163540.1-201ENST00000485382 386 ntBASIC1.25□□□□□ -2.21
APOBP04114 MTERF3-205ENST00000524341 776 ntTSL 3 BASIC1.25□□□□□ -2.21
APOBP04114 AC068339.2-201ENST00000534395 618 ntBASIC1.25□□□□□ -2.21
APOBP04114 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC1.25□□□□□ -2.21
APOBP04114 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC1.25□□□□□ -2.21
APOBP04114 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC1.25□□□□□ -2.21
APOBP04114 AC011978.2-201ENST00000569835 2054 ntBASIC1.25□□□□□ -2.21
APOBP04114 RNY1P14-201ENST00000384426 108 ntBASIC1.25□□□□□ -2.21
APOBP04114 RNU1-57P-201ENST00000384491 166 ntBASIC1.25□□□□□ -2.21
APOBP04114 SNORD88.1-201ENST00000408684 91 ntBASIC1.25□□□□□ -2.21
APOBP04114 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC1.25□□□□□ -2.21
APOBP04114 USP9YP8-201ENST00000441913 500 ntBASIC1.25□□□□□ -2.21
APOBP04114 OR5D17P-201ENST00000531492 978 ntBASIC1.25□□□□□ -2.21
APOBP04114 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.25□□□□□ -2.21
APOBP04114 AC116158.1-201ENST00000560231 2129 ntBASIC1.25□□□□□ -2.21
APOBP04114 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC1.25□□□□□ -2.21
APOBP04114 MIR6767-201ENST00000637302 66 ntBASIC1.25□□□□□ -2.21
APOBP04114 AC006378.2-201ENST00000623178 2476 ntBASIC1.24□□□□□ -2.21
APOBP04114 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC1.24□□□□□ -2.21
APOBP04114 CHD1-201ENST00000284049 6457 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
APOBP04114 Y_RNA.224-201ENST00000364308 111 ntBASIC1.24□□□□□ -2.21
APOBP04114 OR5H15-201ENST00000383696 930 ntBASIC1.24□□□□□ -2.21
APOBP04114 SNORA26.7-201ENST00000391288 122 ntBASIC1.24□□□□□ -2.21
APOBP04114 CEACAMP4-201ENST00000457676 421 ntBASIC1.24□□□□□ -2.21
APOBP04114 RNU6-717P-201ENST00000459076 104 ntBASIC1.24□□□□□ -2.21
APOBP04114 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.24□□□□□ -2.21
APOBP04114 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC1.24□□□□□ -2.21
APOBP04114 AL358333.2-201ENST00000556834 529 ntTSL 5 BASIC1.24□□□□□ -2.21
APOBP04114 AC016590.3-201ENST00000611171 753 ntBASIC1.24□□□□□ -2.21
APOBP04114 AC022709.1-201ENST00000615967 87 ntBASIC1.24□□□□□ -2.21
APOBP04114 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC1.24□□□□□ -2.21
APOBP04114 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC1.24□□□□□ -2.21
APOBP04114 MIR219B-201ENST00000637023 88 ntBASIC1.24□□□□□ -2.21
APOBP04114 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC1.24□□□□□ -2.21
APOBP04114 RNU6-707P-201ENST00000364647 95 ntBASIC1.24□□□□□ -2.21
APOBP04114 RPS26P24-201ENST00000497656 331 ntBASIC1.24□□□□□ -2.21
APOBP04114 MLLT10P2-201ENST00000506434 249 ntBASIC1.24□□□□□ -2.21
APOBP04114 CBX3P4-201ENST00000538909 354 ntBASIC1.24□□□□□ -2.21
APOBP04114 AC114546.1-201ENST00000560140 473 ntTSL 3 BASIC1.24□□□□□ -2.21
APOBP04114 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC1.24□□□□□ -2.21
APOBP04114 CMC2-208ENST00000564249 890 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
APOBP04114 AL139811.1-201ENST00000424779 2299 ntBASIC1.24□□□□□ -2.21
APOBP04114 AC233981.2-201ENST00000611524 1614 ntBASIC1.24□□□□□ -2.21
APOBP04114 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC1.24□□□□□ -2.21
APOBP04114 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC1.24□□□□□ -2.21
APOBP04114 AGL-204ENST00000370161 6923 ntTSL 5 BASIC1.24□□□□□ -2.21
APOBP04114 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC1.24□□□□□ -2.21
APOBP04114 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC1.24□□□□□ -2.21
APOBP04114 HMGB1P11-201ENST00000413899 637 ntBASIC1.24□□□□□ -2.21
APOBP04114 NDUFB4P5-201ENST00000415445 361 ntBASIC1.24□□□□□ -2.21
APOBP04114 AC073136.2-201ENST00000417282 849 ntBASIC1.24□□□□□ -2.21
APOBP04114 MTCYBP31-201ENST00000438855 1122 ntBASIC1.24□□□□□ -2.21
APOBP04114 AC092991.1-201ENST00000477176 376 ntBASIC1.24□□□□□ -2.21
Retrieved 100 of 98,524 protein–RNA pairs in 97 ms