Protein–RNA interactions for Protein: O95786

DDX58, Probable ATP-dependent RNA helicase DDX58, humanhuman

Known RBP Predictions only

Length 925 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58O95786 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC4.25□□□□□ -1.73
DDX58O95786 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
DDX58O95786 AL356473.1-201ENST00000406203 1408 ntBASIC4.24□□□□□ -1.73
DDX58O95786 USP8P1-201ENST00000494673 3183 ntBASIC4.24□□□□□ -1.73
DDX58O95786 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
DDX58O95786 PGAP1-203ENST00000409188 1246 ntTSL 2 BASIC4.24□□□□□ -1.73
DDX58O95786 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.24□□□□□ -1.73
DDX58O95786 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.24□□□□□ -1.73
DDX58O95786 MTATP6P27-201ENST00000416987 621 ntBASIC4.24□□□□□ -1.73
DDX58O95786 AC006960.1-201ENST00000419980 153 ntBASIC4.24□□□□□ -1.73
DDX58O95786 XKRYP1-201ENST00000423438 492 ntBASIC4.24□□□□□ -1.73
DDX58O95786 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC4.24□□□□□ -1.73
DDX58O95786 AL158071.1-201ENST00000430315 461 ntBASIC4.24□□□□□ -1.73
DDX58O95786 XKRYP2-201ENST00000432915 492 ntBASIC4.24□□□□□ -1.73
DDX58O95786 VDAC1P3-201ENST00000434069 851 ntBASIC4.24□□□□□ -1.73
DDX58O95786 PCDH9-AS3-201ENST00000434073 479 ntTSL 2 BASIC4.24□□□□□ -1.73
DDX58O95786 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.24□□□□□ -1.73
DDX58O95786 PTPRG-AS1-202ENST00000466893 823 ntTSL 4 BASIC4.24□□□□□ -1.73
DDX58O95786 RPL7P38-201ENST00000488396 739 ntBASIC4.24□□□□□ -1.73
DDX58O95786 AC026427.2-201ENST00000506228 536 ntBASIC4.24□□□□□ -1.73
DDX58O95786 RNY4P37-201ENST00000516225 96 ntBASIC4.24□□□□□ -1.73
DDX58O95786 OR5AK1P-201ENST00000524837 922 ntBASIC4.24□□□□□ -1.73
DDX58O95786 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX58O95786 AC090503.2-201ENST00000551135 981 ntTSL 3 BASIC4.24□□□□□ -1.73
DDX58O95786 AC005476.1-201ENST00000554427 397 ntBASIC4.24□□□□□ -1.73
DDX58O95786 AC009097.3-201ENST00000563557 1018 ntBASIC4.24□□□□□ -1.73
DDX58O95786 AC015917.1-201ENST00000579654 510 ntBASIC4.24□□□□□ -1.73
DDX58O95786 MIR3200-201ENST00000580767 85 ntBASIC4.24□□□□□ -1.73
DDX58O95786 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX58O95786 AC073657.2-201ENST00000605661 303 ntBASIC4.24□□□□□ -1.73
DDX58O95786 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX58O95786 MIR7112-201ENST00000616126 65 ntBASIC4.24□□□□□ -1.73
DDX58O95786 MIR4278-201ENST00000636094 69 ntBASIC4.24□□□□□ -1.73
DDX58O95786 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
DDX58O95786 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
DDX58O95786 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC4.24□□□□□ -1.73
DDX58O95786 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.24□□□□□ -1.73
DDX58O95786 CEP170-202ENST00000366542 6828 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
DDX58O95786 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX58O95786 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
DDX58O95786 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
DDX58O95786 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX58O95786 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX58O95786 RNU2-71P-201ENST00000411395 189 ntBASIC4.23□□□□□ -1.73
DDX58O95786 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX58O95786 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX58O95786 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
DDX58O95786 AL008987.1-201ENST00000415528 237 ntBASIC4.23□□□□□ -1.73
DDX58O95786 RPL22P18-201ENST00000417197 377 ntBASIC4.23□□□□□ -1.73
DDX58O95786 AL590730.1-201ENST00000426283 398 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX58O95786 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX58O95786 MTND4LP10-201ENST00000435146 291 ntBASIC4.23□□□□□ -1.73
DDX58O95786 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX58O95786 RPL7P28-201ENST00000437739 740 ntBASIC4.23□□□□□ -1.73
DDX58O95786 AC006028.1-201ENST00000438379 402 ntBASIC4.23□□□□□ -1.73
DDX58O95786 MTND3P1-201ENST00000441336 220 ntBASIC4.23□□□□□ -1.73
DDX58O95786 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX58O95786 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX58O95786 AC005297.2-201ENST00000450430 606 ntBASIC4.23□□□□□ -1.73
DDX58O95786 DCLRE1CP1-201ENST00000454630 470 ntBASIC4.23□□□□□ -1.73
DDX58O95786 snoU109.4-201ENST00000458953 143 ntBASIC4.23□□□□□ -1.73
DDX58O95786 snoU13.24-201ENST00000458998 104 ntBASIC4.23□□□□□ -1.73
DDX58O95786 RPL21P104-201ENST00000464143 478 ntBASIC4.23□□□□□ -1.73
DDX58O95786 AC106872.2-201ENST00000494303 480 ntBASIC4.23□□□□□ -1.73
DDX58O95786 AC090453.1-201ENST00000495560 436 ntBASIC4.23□□□□□ -1.73
DDX58O95786 FCF1P3-201ENST00000496394 590 ntBASIC4.23□□□□□ -1.73
DDX58O95786 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX58O95786 AC021678.1-201ENST00000505195 936 ntBASIC4.23□□□□□ -1.73
DDX58O95786 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX58O95786 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX58O95786 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX58O95786 MEF2C-AS1-212ENST00000514158 713 ntTSL 5 BASIC4.23□□□□□ -1.73
DDX58O95786 RN7SKP287-201ENST00000516546 266 ntBASIC4.23□□□□□ -1.73
DDX58O95786 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
DDX58O95786 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC4.23□□□□□ -1.73
DDX58O95786 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC4.23□□□□□ -1.73
DDX58O95786 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX58O95786 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX58O95786 AC009117.2-201ENST00000565374 504 ntTSL 3 BASIC4.23□□□□□ -1.73
DDX58O95786 MTATP6P24-201ENST00000576835 677 ntBASIC4.23□□□□□ -1.73
DDX58O95786 AL606834.2-201ENST00000602954 668 ntBASIC4.23□□□□□ -1.73
DDX58O95786 AL162713.1-201ENST00000604480 262 ntBASIC4.23□□□□□ -1.73
DDX58O95786 AC025588.2-201ENST00000604851 466 ntBASIC4.23□□□□□ -1.73
DDX58O95786 AC093424.1-201ENST00000604999 338 ntBASIC4.23□□□□□ -1.73
DDX58O95786 AL158042.1-201ENST00000605338 460 ntBASIC4.23□□□□□ -1.73
DDX58O95786 AC006023.2-201ENST00000609916 167 ntBASIC4.23□□□□□ -1.73
DDX58O95786 AC087683.2-201ENST00000611384 326 ntBASIC4.23□□□□□ -1.73
DDX58O95786 AC004009.2-201ENST00000623016 728 ntBASIC4.23□□□□□ -1.73
DDX58O95786 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX58O95786 KIF2A-205ENST00000506857 2219 ntTSL 2 BASIC4.23□□□□□ -1.73
DDX58O95786 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
DDX58O95786 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX58O95786 SYT14-204ENST00000472886 2966 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
DDX58O95786 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
DDX58O95786 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
DDX58O95786 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
DDX58O95786 FAM35DP-201ENST00000323387 2712 ntBASIC4.22□□□□□ -1.73
DDX58O95786 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC4.22□□□□□ -1.73
DDX58O95786 SNORD51-201ENST00000384320 80 ntBASIC4.22□□□□□ -1.73
DDX58O95786 MIR1284-201ENST00000408337 120 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms