Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AP001486.2-201ENST00000561652 5113 ntBASIC3.65□□□□□ -1.82
NKX2-2O95096 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.65□□□□□ -1.82
NKX2-2O95096 AC092125.1-201ENST00000562568 1995 ntBASIC3.65□□□□□ -1.82
NKX2-2O95096 CAPS2-206ENST00000409799 1859 ntTSL 1 (best) BASIC3.65□□□□□ -1.82
NKX2-2O95096 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC3.65□□□□□ -1.83
NKX2-2O95096 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NKX2-2O95096 RNU5E-5P-201ENST00000365379 116 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 RNU6-809P-201ENST00000384461 107 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 SNORD115.1-201ENST00000391109 76 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.65□□□□□ -1.83
NKX2-2O95096 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.65□□□□□ -1.83
NKX2-2O95096 RPS7P13-201ENST00000413955 498 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.65□□□□□ -1.83
NKX2-2O95096 DUTP6-201ENST00000425573 462 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX2-2O95096 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX2-2O95096 AL138799.3-201ENST00000438968 350 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 THAP5P1-201ENST00000439089 262 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 AP001432.1-201ENST00000440629 520 ntTSL 2 BASIC3.65□□□□□ -1.83
NKX2-2O95096 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX2-2O95096 TPT1P12-201ENST00000448968 492 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 AL451050.1-201ENST00000450126 415 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 SNRPGP5-201ENST00000456003 220 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 SNRPGP9-201ENST00000456025 225 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 LINC01445-202ENST00000458615 679 ntTSL 2 BASIC3.65□□□□□ -1.83
NKX2-2O95096 RNA5SP269-201ENST00000459032 137 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.65□□□□□ -1.83
NKX2-2O95096 AC008883.2-201ENST00000505796 414 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX2-2O95096 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX2-2O95096 AC026726.1-201ENST00000512859 601 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 MTND5P13-201ENST00000513046 1079 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX2-2O95096 Y_RNA.695-201ENST00000516715 107 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC3.65□□□□□ -1.83
NKX2-2O95096 MEG8-218ENST00000556720 456 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX2-2O95096 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 AC066612.2-201ENST00000559875 695 ntTSL 2 BASIC3.65□□□□□ -1.83
NKX2-2O95096 AC060771.1-201ENST00000582031 164 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 AP001429.1-201ENST00000602568 530 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 AC068276.1-201ENST00000605793 379 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.65□□□□□ -1.83
NKX2-2O95096 TMBIM4-213ENST00000613669 851 ntTSL 5 BASIC3.65□□□□□ -1.83
NKX2-2O95096 AL158196.1-201ENST00000616786 434 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 AL713922.2-201ENST00000619384 716 ntBASIC3.65□□□□□ -1.83
NKX2-2O95096 RFX7-201ENST00000559447 10426 ntAPPRIS P5 TSL 5 BASIC3.65□□□□□ -1.83
NKX2-2O95096 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.64□□□□□ -1.83
NKX2-2O95096 TPTE2-201ENST00000255310 1562 ntTSL 5 BASIC3.64□□□□□ -1.83
NKX2-2O95096 EVI2B-202ENST00000577894 1597 ntAPPRIS P1 TSL 2 BASIC3.64□□□□□ -1.83
NKX2-2O95096 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NKX2-2O95096 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NKX2-2O95096 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NKX2-2O95096 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NKX2-2O95096 Y_RNA.46-201ENST00000362695 102 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 RNA5SP443-201ENST00000363083 132 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 SNORA70.2-201ENST00000364506 135 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 RNU6-1078P-201ENST00000364522 103 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 RNU6-533P-201ENST00000384144 107 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 RNU1-13P-201ENST00000384499 162 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 RNU6-882P-201ENST00000391025 103 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 RPL7P25-201ENST00000404151 721 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 RNU2-43P-201ENST00000410306 190 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 MTND1P21-201ENST00000412991 285 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC3.64□□□□□ -1.83
NKX2-2O95096 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.64□□□□□ -1.83
NKX2-2O95096 SLC44A3-AS1-205ENST00000424505 612 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 RSL24D1P6-201ENST00000426934 401 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 SKP1P1-201ENST00000438081 489 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 AL121871.1-201ENST00000443413 436 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NKX2-2O95096 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.64□□□□□ -1.83
NKX2-2O95096 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC3.64□□□□□ -1.83
NKX2-2O95096 AC007967.1-201ENST00000455422 1159 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 SNRPFP4-201ENST00000456366 242 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 AC112204.1-201ENST00000502591 103 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 RNU6-1073P-201ENST00000517182 106 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 HIGD1AP5-201ENST00000529959 259 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 OR5D17P-201ENST00000531492 978 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC3.64□□□□□ -1.83
NKX2-2O95096 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC3.64□□□□□ -1.83
NKX2-2O95096 AC013437.1-201ENST00000549878 414 ntTSL 3 BASIC3.64□□□□□ -1.83
NKX2-2O95096 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.64□□□□□ -1.83
NKX2-2O95096 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.64□□□□□ -1.83
NKX2-2O95096 BNIP3P5-201ENST00000562290 498 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC3.64□□□□□ -1.83
NKX2-2O95096 AC136624.4-201ENST00000573044 370 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC3.64□□□□□ -1.83
NKX2-2O95096 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.64□□□□□ -1.83
NKX2-2O95096 AL158211.4-201ENST00000606988 584 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 AC012150.2-201ENST00000621300 544 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 AC103858.2-201ENST00000621471 543 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 AC244258.1-201ENST00000637553 1071 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NKX2-2O95096 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
NKX2-2O95096 MTCO1P9-201ENST00000505577 1534 ntBASIC3.64□□□□□ -1.83
NKX2-2O95096 SCN3A-201ENST00000283254 9091 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
NKX2-2O95096 ADGRL2-208ENST00000370725 5293 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
NKX2-2O95096 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
NKX2-2O95096 AC018555.1-201ENST00000567548 1980 ntBASIC3.63□□□□□ -1.83
NKX2-2O95096 FAP-214ENST00000627638 2569 ntAPPRIS ALT1 TSL 5 BASIC3.63□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms