Protein–RNA interactions for Protein: O94913

PCF11, Pre-mRNA cleavage complex 2 protein Pcf11, humanhuman

Known RBP Predictions only

Length 1,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11O94913 RMDN2-205ENST00000407257 2280 ntTSL 5 BASIC3.51□□□□□ -1.85
PCF11O94913 MACF1-204ENST00000372915 23440 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
PCF11O94913 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCF11O94913 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
PCF11O94913 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
PCF11O94913 OR5H15-201ENST00000383696 930 ntBASIC3.51□□□□□ -1.85
PCF11O94913 MIR92A2-201ENST00000385299 75 ntBASIC3.51□□□□□ -1.85
PCF11O94913 RNU6-328P-201ENST00000390887 106 ntBASIC3.51□□□□□ -1.85
PCF11O94913 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC3.51□□□□□ -1.85
PCF11O94913 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
PCF11O94913 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.51□□□□□ -1.85
PCF11O94913 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC3.51□□□□□ -1.85
PCF11O94913 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.51□□□□□ -1.85
PCF11O94913 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC3.51□□□□□ -1.85
PCF11O94913 NFU1-207ENST00000462320 558 ntTSL 4 BASIC3.51□□□□□ -1.85
PCF11O94913 NDUFB4P9-201ENST00000511646 388 ntBASIC3.51□□□□□ -1.85
PCF11O94913 AC105137.2-201ENST00000569073 466 ntBASIC3.51□□□□□ -1.85
PCF11O94913 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
PCF11O94913 MTND5P29-201ENST00000458676 1807 ntBASIC3.5□□□□□ -1.85
PCF11O94913 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
PCF11O94913 AL139276.1-201ENST00000311910 1001 ntBASIC3.5□□□□□ -1.85
PCF11O94913 MIR378A-201ENST00000362177 66 ntBASIC3.5□□□□□ -1.85
PCF11O94913 RNU6-582P-201ENST00000362989 107 ntBASIC3.5□□□□□ -1.85
PCF11O94913 U3.15-201ENST00000365398 212 ntBASIC3.5□□□□□ -1.85
PCF11O94913 U8.8-201ENST00000365399 135 ntBASIC3.5□□□□□ -1.85
PCF11O94913 MIR124-3-201ENST00000384866 87 ntBASIC3.5□□□□□ -1.85
PCF11O94913 MIR221-201ENST00000385135 110 ntBASIC3.5□□□□□ -1.85
PCF11O94913 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
PCF11O94913 NDUFB4P6-201ENST00000436819 366 ntBASIC3.5□□□□□ -1.85
PCF11O94913 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.5□□□□□ -1.85
PCF11O94913 AC004263.1-201ENST00000479327 332 ntBASIC3.5□□□□□ -1.85
PCF11O94913 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.5□□□□□ -1.85
PCF11O94913 THAP6-203ENST00000502620 582 ntTSL 3 BASIC3.5□□□□□ -1.85
PCF11O94913 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.5□□□□□ -1.85
PCF11O94913 AC026412.2-201ENST00000512270 1075 ntBASIC3.5□□□□□ -1.85
PCF11O94913 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.5□□□□□ -1.85
PCF11O94913 AC068339.2-201ENST00000534395 618 ntBASIC3.5□□□□□ -1.85
PCF11O94913 AC006254.3-201ENST00000603353 884 ntBASIC3.5□□□□□ -1.85
PCF11O94913 AC009831.4-201ENST00000620744 325 ntBASIC3.5□□□□□ -1.85
PCF11O94913 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC3.49□□□□□ -1.85
PCF11O94913 AC026241.1-201ENST00000517873 2142 ntBASIC3.49□□□□□ -1.85
PCF11O94913 RN7SKP32-201ENST00000410167 303 ntBASIC3.49□□□□□ -1.85
PCF11O94913 LUZP4P1-201ENST00000415420 344 ntBASIC3.49□□□□□ -1.85
PCF11O94913 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
PCF11O94913 AC005840.1-201ENST00000498412 377 ntBASIC3.49□□□□□ -1.85
PCF11O94913 RNA5SP490-201ENST00000517141 136 ntBASIC3.49□□□□□ -1.85
PCF11O94913 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.49□□□□□ -1.85
PCF11O94913 AP001521.1-201ENST00000609150 300 ntBASIC3.49□□□□□ -1.85
PCF11O94913 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC3.48□□□□□ -1.85
PCF11O94913 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCF11O94913 SNORD6-201ENST00000365444 73 ntBASIC3.48□□□□□ -1.85
PCF11O94913 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PCF11O94913 AL354719.1-201ENST00000406535 843 ntBASIC3.48□□□□□ -1.85
PCF11O94913 LINC01867-201ENST00000435357 604 ntTSL 2 BASIC3.48□□□□□ -1.85
PCF11O94913 NPM1P49-201ENST00000448027 714 ntBASIC3.48□□□□□ -1.85
PCF11O94913 CALM1P2-201ENST00000452941 448 ntBASIC3.48□□□□□ -1.85
PCF11O94913 SCARNA16.3-201ENST00000516595 184 ntBASIC3.48□□□□□ -1.85
PCF11O94913 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC3.48□□□□□ -1.85
PCF11O94913 C11orf65-206ENST00000529391 973 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
PCF11O94913 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC3.48□□□□□ -1.85
PCF11O94913 SNRPGP18-201ENST00000553000 214 ntBASIC3.48□□□□□ -1.85
PCF11O94913 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC3.48□□□□□ -1.85
PCF11O94913 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.48□□□□□ -1.85
PCF11O94913 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
PCF11O94913 GABRA2-209ENST00000510861 3411 ntAPPRIS P1 TSL 5 BASIC3.48□□□□□ -1.85
PCF11O94913 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC3.48□□□□□ -1.85
PCF11O94913 MGAT4C-202ENST00000548651 2159 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
PCF11O94913 RPL31P52-201ENST00000407532 367 ntBASIC3.47□□□□□ -1.85
PCF11O94913 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.47□□□□□ -1.85
PCF11O94913 RRAS2-205ENST00000529237 1278 ntTSL 2 BASIC3.47□□□□□ -1.85
PCF11O94913 C1GALT1P1-201ENST00000548895 1089 ntBASIC3.47□□□□□ -1.85
PCF11O94913 TPMTP1-201ENST00000592307 737 ntBASIC3.47□□□□□ -1.85
PCF11O94913 AC084373.1-201ENST00000603311 235 ntBASIC3.47□□□□□ -1.85
PCF11O94913 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.47□□□□□ -1.85
PCF11O94913 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.47□□□□□ -1.85
PCF11O94913 AC010378.1-201ENST00000619270 362 ntBASIC3.47□□□□□ -1.85
PCF11O94913 SGMS2-201ENST00000359079 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
PCF11O94913 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.46□□□□□ -1.85
PCF11O94913 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC3.46□□□□□ -1.85
PCF11O94913 MT-TP-201ENST00000387461 68 ntBASIC3.46□□□□□ -1.85
PCF11O94913 RNU2-2P-201ENST00000410396 191 ntBASIC3.46□□□□□ -1.85
PCF11O94913 AC092832.1-201ENST00000422934 400 ntBASIC3.46□□□□□ -1.85
PCF11O94913 AC023050.1-201ENST00000498198 304 ntBASIC3.46□□□□□ -1.85
PCF11O94913 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.46□□□□□ -1.85
PCF11O94913 AP003385.6-201ENST00000531603 374 ntBASIC3.46□□□□□ -1.85
PCF11O94913 REXO2-218ENST00000544827 880 ntTSL 3 BASIC3.46□□□□□ -1.85
PCF11O94913 PLSCR2-206ENST00000610787 1001 ntAPPRIS P1 TSL 1 (best) BASIC3.46□□□□□ -1.85
PCF11O94913 U2.15-201ENST00000611544 191 ntBASIC3.46□□□□□ -1.85
PCF11O94913 U2.16-201ENST00000613119 191 ntBASIC3.46□□□□□ -1.85
PCF11O94913 U2.12-201ENST00000613778 191 ntBASIC3.46□□□□□ -1.85
PCF11O94913 U2.20-201ENST00000613956 192 ntBASIC3.46□□□□□ -1.85
PCF11O94913 U2.9-201ENST00000615427 191 ntBASIC3.46□□□□□ -1.85
PCF11O94913 U2.11-201ENST00000616345 191 ntBASIC3.46□□□□□ -1.85
PCF11O94913 U2.2-201ENST00000616535 191 ntBASIC3.46□□□□□ -1.85
PCF11O94913 U2.3-201ENST00000617785 191 ntBASIC3.46□□□□□ -1.85
PCF11O94913 U2.19-201ENST00000618602 191 ntBASIC3.46□□□□□ -1.85
PCF11O94913 RNU2-1-201ENST00000618664 191 ntBASIC3.46□□□□□ -1.85
PCF11O94913 U2.6-201ENST00000619225 191 ntBASIC3.46□□□□□ -1.85
PCF11O94913 U2.5-201ENST00000619465 191 ntBASIC3.46□□□□□ -1.85
PCF11O94913 U2.10-201ENST00000620268 191 ntBASIC3.46□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 80.5 ms