Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 AC244100.1-202ENST00000621554 382 ntBASIC6.15□□□□□ -1.42
PTCD1O75127 RNF123-214ENST00000629802 207 ntTSL 5 BASIC6.15□□□□□ -1.42
PTCD1O75127 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PTCD1O75127 SNX18P3-202ENST00000565670 1750 ntBASIC6.15□□□□□ -1.43
PTCD1O75127 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PTCD1O75127 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
PTCD1O75127 RIMS2-205ENST00000436393 4384 ntTSL 2 BASIC6.15□□□□□ -1.43
PTCD1O75127 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
PTCD1O75127 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
PTCD1O75127 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
PTCD1O75127 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTCD1O75127 AC083843.2-201ENST00000568248 6253 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 AC073343.1-201ENST00000328239 651 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 Y_RNA.22-201ENST00000362492 102 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 Y_RNA.202-201ENST00000364083 110 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 SNORA62.1-201ENST00000364287 154 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 Y_RNA.373-201ENST00000365600 103 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 RNU6-641P-201ENST00000384006 107 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 MIR454-201ENST00000390180 115 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 RPL5P18-201ENST00000406671 891 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 RPS21P8-201ENST00000413365 247 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
PTCD1O75127 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC6.14□□□□□ -1.43
PTCD1O75127 AC127537.2-201ENST00000439258 465 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC6.14□□□□□ -1.43
PTCD1O75127 MTND5P22-201ENST00000458380 195 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 Y_RNA.631-201ENST00000459607 101 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 PPIAP21-201ENST00000464473 501 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 MTND4P17-201ENST00000470444 350 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCD1O75127 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.14□□□□□ -1.43
PTCD1O75127 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC6.14□□□□□ -1.43
PTCD1O75127 AC093840.1-201ENST00000511599 336 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCD1O75127 RFPL4AP5-201ENST00000514977 504 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 RPS27AP18-201ENST00000515536 459 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 RNU1-6P-201ENST00000516290 144 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 ARL6IP1P1-201ENST00000545836 610 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCD1O75127 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.14□□□□□ -1.43
PTCD1O75127 NELL2-211ENST00000548826 559 ntTSL 2 BASIC6.14□□□□□ -1.43
PTCD1O75127 AC124068.1-201ENST00000563131 678 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 AC084783.1-201ENST00000565846 910 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 AC069061.3-201ENST00000582254 823 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC6.14□□□□□ -1.43
PTCD1O75127 AC103710.3-201ENST00000608157 948 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 AL590099.1-201ENST00000615276 138 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
PTCD1O75127 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC6.14□□□□□ -1.43
PTCD1O75127 AL122126.1-201ENST00000546905 1318 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 AC010329.2-201ENST00000595195 2737 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.14□□□□□ -1.43
PTCD1O75127 AP004289.2-201ENST00000444413 1457 ntBASIC6.14□□□□□ -1.43
PTCD1O75127 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PTCD1O75127 A2MP1-204ENST00000566278 4130 ntBASIC6.13□□□□□ -1.43
PTCD1O75127 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PTCD1O75127 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC6.13□□□□□ -1.43
PTCD1O75127 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PTCD1O75127 Y_RNA.193-201ENST00000363979 102 ntBASIC6.13□□□□□ -1.43
PTCD1O75127 U3.11-201ENST00000364476 212 ntBASIC6.13□□□□□ -1.43
PTCD1O75127 Y_RNA.259-201ENST00000364619 101 ntBASIC6.13□□□□□ -1.43
PTCD1O75127 RNU6-278P-201ENST00000390945 109 ntBASIC6.13□□□□□ -1.43
PTCD1O75127 DEFB110-202ENST00000393660 189 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCD1O75127 RNU6-603P-201ENST00000411403 107 ntBASIC6.13□□□□□ -1.43
PTCD1O75127 AC140479.3-201ENST00000418944 1126 ntBASIC6.13□□□□□ -1.43
PTCD1O75127 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC6.13□□□□□ -1.43
PTCD1O75127 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.13□□□□□ -1.43
PTCD1O75127 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC6.13□□□□□ -1.43
PTCD1O75127 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC6.13□□□□□ -1.43
PTCD1O75127 MTND1P9-201ENST00000453775 944 ntBASIC6.13□□□□□ -1.43
PTCD1O75127 AC090096.1-201ENST00000489168 390 ntBASIC6.13□□□□□ -1.43
PTCD1O75127 ENPP7P11-201ENST00000505915 627 ntBASIC6.13□□□□□ -1.43
PTCD1O75127 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC6.13□□□□□ -1.43
PTCD1O75127 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.13□□□□□ -1.43
PTCD1O75127 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.13□□□□□ -1.43
PTCD1O75127 AP001180.2-201ENST00000579413 422 ntTSL 5 BASIC6.13□□□□□ -1.43
PTCD1O75127 AC023575.1-201ENST00000580510 358 ntBASIC6.13□□□□□ -1.43
PTCD1O75127 NUTF2P8-201ENST00000604593 363 ntBASIC6.13□□□□□ -1.43
PTCD1O75127 AC116447.1-201ENST00000613153 453 ntBASIC6.13□□□□□ -1.43
PTCD1O75127 AC087588.2-201ENST00000617667 426 ntBASIC6.13□□□□□ -1.43
PTCD1O75127 ATM-228ENST00000639240 498 ntTSL 5 BASIC6.13□□□□□ -1.43
PTCD1O75127 ATM-230ENST00000640388 578 ntTSL 5 BASIC6.13□□□□□ -1.43
PTCD1O75127 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PTCD1O75127 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCD1O75127 FTX-210ENST00000603037 8347 ntTSL 5 BASIC6.13□□□□□ -1.43
PTCD1O75127 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCD1O75127 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCD1O75127 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.13□□□□□ -1.43
PTCD1O75127 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
PTCD1O75127 NUDT12-202ENST00000507423 1781 ntTSL 2 BASIC6.13□□□□□ -1.43
PTCD1O75127 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCD1O75127 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.13□□□□□ -1.43
PTCD1O75127 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
PTCD1O75127 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC6.13□□□□□ -1.43
PTCD1O75127 AL360014.1-201ENST00000562922 2084 ntTSL 3 BASIC6.13□□□□□ -1.43
PTCD1O75127 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC6.13□□□□□ -1.43
PTCD1O75127 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
PTCD1O75127 ACADSB-201ENST00000358776 5859 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PTCD1O75127 AC140134.1-201ENST00000511830 3544 ntBASIC6.12□□□□□ -1.43
PTCD1O75127 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC6.12□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms