Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 AP000676.2-201ENST00000529711 301 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 OR4T1P-201ENST00000554933 911 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM13O60858 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC4.81□□□□□ -1.64
TRIM13O60858 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.81□□□□□ -1.64
TRIM13O60858 LINC02165-201ENST00000563061 443 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM13O60858 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM13O60858 TVP23CP2-201ENST00000571473 623 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 AC131274.1-201ENST00000582507 254 ntTSL 3 BASIC4.81□□□□□ -1.64
TRIM13O60858 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM13O60858 AC009237.17-201ENST00000618111 748 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 AL162373.1-201ENST00000620433 407 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 AC019206.1-201ENST00000621938 425 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 AC091953.2-201ENST00000623979 160 ntBASIC4.81□□□□□ -1.64
TRIM13O60858 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRIM13O60858 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM13O60858 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM13O60858 PIGN-242ENST00000640145 4505 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
TRIM13O60858 TRIQK-212ENST00000520686 1808 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
TRIM13O60858 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.81□□□□□ -1.64
TRIM13O60858 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM13O60858 AC114546.3-201ENST00000623582 1734 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM13O60858 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC4.8□□□□□ -1.64
TRIM13O60858 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM13O60858 AC097504.1-201ENST00000515103 2415 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 RNU6-1188P-201ENST00000363795 107 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 RNU6-522P-201ENST00000364497 107 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 U3.12-201ENST00000364498 214 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 RNU6-657P-201ENST00000383904 107 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 RNU6-1013P-201ENST00000384180 107 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 SNORD37.1-201ENST00000390968 65 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 PRRC2CP1-201ENST00000404428 159 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 DUTP5-201ENST00000406790 469 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 RNA5SP178-201ENST00000410380 128 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 RN7SKP126-201ENST00000411143 300 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 DDX39BP1-205ENST00000422507 192 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 AC018865.2-201ENST00000423631 129 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 RPS27P18-201ENST00000431701 247 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 RPL37P1-201ENST00000432310 284 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM13O60858 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM13O60858 AL138767.2-201ENST00000446794 168 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM13O60858 APOA2-207ENST00000470459 416 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM13O60858 AC097484.1-201ENST00000471148 389 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 RN7SL591P-201ENST00000496150 292 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC4.8□□□□□ -1.64
TRIM13O60858 RNU4ATAC8P-201ENST00000516196 109 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 RNA5SP464-201ENST00000516251 108 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 RNU6-789P-201ENST00000517105 102 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM13O60858 RANP9-201ENST00000519957 271 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 AP001804.3-201ENST00000525146 880 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 CLEC7A-212ENST00000533022 625 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM13O60858 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM13O60858 AC087392.1-201ENST00000576252 820 ntTSL 2 BASIC4.8□□□□□ -1.64
TRIM13O60858 MIR5186-201ENST00000577504 120 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM13O60858 SNORA74C-1-201ENST00000580726 201 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC4.8□□□□□ -1.64
TRIM13O60858 PSMA6P4-201ENST00000603247 718 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 AP001005.3-201ENST00000622049 129 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC4.8□□□□□ -1.64
TRIM13O60858 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM13O60858 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
TRIM13O60858 AC010329.2-201ENST00000595195 2737 ntBASIC4.8□□□□□ -1.64
TRIM13O60858 HIPK3-204ENST00000525975 3668 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM13O60858 SMAD5-212ENST00000545620 6937 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
TRIM13O60858 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM13O60858 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM13O60858 EFTUD1P2-201ENST00000514817 1603 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 AC008758.3-201ENST00000507003 1829 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM13O60858 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM13O60858 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC4.79□□□□□ -1.64
TRIM13O60858 RNU6-1115P-201ENST00000362490 106 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 RNA5SP132-201ENST00000364725 118 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 Y_RNA.414-201ENST00000384011 101 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 Y_RNA.489-201ENST00000384410 101 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 MIR92A2-201ENST00000385299 75 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 AC078974.1-201ENST00000411597 223 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 RPL37P10-201ENST00000412884 288 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 AC074085.1-201ENST00000413598 418 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 PRELID3BP11-201ENST00000414230 479 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM13O60858 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM13O60858 AC007283.2-201ENST00000424739 197 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 NRBF2P3-201ENST00000432731 865 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 ZBTB40-IT1-201ENST00000438551 273 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM13O60858 AC079781.2-201ENST00000446424 169 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 PPIA-203ENST00000451562 544 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM13O60858 AC092647.2-201ENST00000452998 253 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC4.79□□□□□ -1.64
TRIM13O60858 AC023141.9-201ENST00000458734 412 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 RNU7-66P-201ENST00000459469 62 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 AL136537.1-202ENST00000501725 430 ntTSL 3 BASIC4.79□□□□□ -1.64
TRIM13O60858 AC110794.1-201ENST00000505816 425 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 COX6B1P5-201ENST00000509843 249 ntBASIC4.79□□□□□ -1.64
TRIM13O60858 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms