Protein–RNA interactions for Protein: O60391

GRIN3B, Glutamate receptor ionotropic, NMDA 3B, humanhuman

Predictions only

Length 1,043 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GRIN3BO60391 SNORA69-201ENST00000383895 132 ntBASIC5.59□□□□□ -1.51
GRIN3BO60391 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GRIN3BO60391 AL356057.2-201ENST00000403318 432 ntBASIC5.59□□□□□ -1.51
GRIN3BO60391 AC069218.2-201ENST00000411665 344 ntBASIC5.59□□□□□ -1.51
GRIN3BO60391 AC114763.2-201ENST00000412593 826 ntTSL 2 BASIC5.59□□□□□ -1.51
GRIN3BO60391 LINC00894-201ENST00000413076 403 ntTSL 3 BASIC5.59□□□□□ -1.51
GRIN3BO60391 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.59□□□□□ -1.51
GRIN3BO60391 RPL31P45-201ENST00000419532 356 ntBASIC5.59□□□□□ -1.51
GRIN3BO60391 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC5.59□□□□□ -1.51
GRIN3BO60391 AL590233.1-201ENST00000430017 456 ntBASIC5.59□□□□□ -1.51
GRIN3BO60391 AL606489.2-201ENST00000433886 234 ntBASIC5.59□□□□□ -1.51
GRIN3BO60391 AC079354.3-201ENST00000447111 311 ntTSL 2 BASIC5.59□□□□□ -1.51
GRIN3BO60391 AL500522.2-201ENST00000448562 343 ntBASIC5.59□□□□□ -1.51
GRIN3BO60391 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC5.59□□□□□ -1.51
GRIN3BO60391 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC5.59□□□□□ -1.51
GRIN3BO60391 AC110799.1-201ENST00000509098 449 ntTSL 3 BASIC5.59□□□□□ -1.51
GRIN3BO60391 GMPSP1-201ENST00000514075 579 ntBASIC5.59□□□□□ -1.51
GRIN3BO60391 RNA5SP230-201ENST00000517039 122 ntBASIC5.59□□□□□ -1.51
GRIN3BO60391 AC090572.1-201ENST00000519251 160 ntBASIC5.59□□□□□ -1.51
GRIN3BO60391 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC5.59□□□□□ -1.51
GRIN3BO60391 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.59□□□□□ -1.51
GRIN3BO60391 AC008415.1-201ENST00000522189 734 ntTSL 5 BASIC5.59□□□□□ -1.51
GRIN3BO60391 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC5.59□□□□□ -1.51
GRIN3BO60391 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC5.59□□□□□ -1.51
GRIN3BO60391 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC5.59□□□□□ -1.51
GRIN3BO60391 AC022884.2-201ENST00000578535 580 ntBASIC5.59□□□□□ -1.51
GRIN3BO60391 RN7SL600P-201ENST00000581811 299 ntBASIC5.59□□□□□ -1.51
GRIN3BO60391 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC5.59□□□□□ -1.51
GRIN3BO60391 NF1P5-201ENST00000588287 448 ntBASIC5.59□□□□□ -1.51
GRIN3BO60391 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC5.59□□□□□ -1.51
GRIN3BO60391 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.59□□□□□ -1.51
GRIN3BO60391 MIR6864-201ENST00000617935 70 ntBASIC5.59□□□□□ -1.51
GRIN3BO60391 AL354696.2-202ENST00000620300 613 ntTSL 2 BASIC5.59□□□□□ -1.51
GRIN3BO60391 AL158801.5-201ENST00000623123 465 ntBASIC5.59□□□□□ -1.51
GRIN3BO60391 SRP54-214ENST00000630962 162 ntTSL 5 BASIC5.59□□□□□ -1.51
GRIN3BO60391 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.59□□□□□ -1.51
GRIN3BO60391 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GRIN3BO60391 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC5.59□□□□□ -1.51
GRIN3BO60391 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
GRIN3BO60391 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC5.59□□□□□ -1.52
GRIN3BO60391 CEP192-203ENST00000506447 7960 ntAPPRIS P2 TSL 5 BASIC5.59□□□□□ -1.52
GRIN3BO60391 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.52
GRIN3BO60391 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GRIN3BO60391 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC5.58□□□□□ -1.52
GRIN3BO60391 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GRIN3BO60391 CFAP47-203ENST00000378653 9943 ntAPPRIS P2 TSL 5 BASIC5.58□□□□□ -1.52
GRIN3BO60391 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GRIN3BO60391 RNA5SP391-201ENST00000363456 119 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 RNU1-130P-201ENST00000363930 160 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 RNY1P12-201ENST00000364251 105 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 RNU6-1158P-201ENST00000391167 107 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.58□□□□□ -1.52
GRIN3BO60391 RPL6P29-201ENST00000414863 865 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 AC012065.2-201ENST00000421295 375 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.58□□□□□ -1.52
GRIN3BO60391 AC092162.1-201ENST00000432828 434 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 GPR143P-201ENST00000434155 205 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 AC108734.1-201ENST00000439549 399 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC5.58□□□□□ -1.52
GRIN3BO60391 AC026427.2-201ENST00000506228 536 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.58□□□□□ -1.52
GRIN3BO60391 Y_RNA.675-201ENST00000516389 149 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 TRMT10BP1-201ENST00000519377 943 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC5.58□□□□□ -1.52
GRIN3BO60391 TRAV8-5-201ENST00000537369 341 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC5.58□□□□□ -1.52
GRIN3BO60391 AC020978.4-201ENST00000569088 460 ntTSL 3 BASIC5.58□□□□□ -1.52
GRIN3BO60391 KC877982.1-201ENST00000602313 470 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC5.58□□□□□ -1.52
GRIN3BO60391 AL162730.1-201ENST00000605734 292 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 AL391813.2-201ENST00000609113 322 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 RDM1-221ENST00000617591 432 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
GRIN3BO60391 AL596245.1-201ENST00000618994 362 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 AC009318.4-201ENST00000620496 486 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 FRG1KP-201ENST00000623592 341 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 MTND5P42-201ENST00000637720 498 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
GRIN3BO60391 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5.58□□□□□ -1.52
GRIN3BO60391 AC009229.4-201ENST00000623854 1947 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 AC006484.1-201ENST00000435086 1884 ntBASIC5.58□□□□□ -1.52
GRIN3BO60391 CEP120-203ENST00000328236 4710 ntAPPRIS P1 TSL 5 BASIC5.57□□□□□ -1.52
GRIN3BO60391 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.57□□□□□ -1.52
GRIN3BO60391 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
GRIN3BO60391 GVINP1-202ENST00000531871 7271 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC5.57□□□□□ -1.52
GRIN3BO60391 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.57□□□□□ -1.52
GRIN3BO60391 MIR34B-201ENST00000385076 84 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 AC068050.1-201ENST00000394891 380 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 SSXP10-201ENST00000402595 565 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC5.57□□□□□ -1.52
GRIN3BO60391 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC5.57□□□□□ -1.52
GRIN3BO60391 AL121872.1-202ENST00000435867 308 ntTSL 5 BASIC5.57□□□□□ -1.52
GRIN3BO60391 AC002553.2-201ENST00000453217 340 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 RPS27AP17-201ENST00000463344 455 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 AC090602.1-201ENST00000469695 252 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
GRIN3BO60391 FTH1P24-201ENST00000503502 462 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 AC093767.1-201ENST00000504523 156 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 AC110768.1-201ENST00000509222 400 ntBASIC5.57□□□□□ -1.52
GRIN3BO60391 RFPL4AP5-201ENST00000514977 504 ntBASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 123.4 ms