Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 ARF4P3-201ENST00000397387 509 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 RNA5SP80-201ENST00000410475 111 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 HMGN1P24-201ENST00000412282 298 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AC109780.2-201ENST00000413467 845 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AL592310.1-201ENST00000414330 671 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AC093865.1-201ENST00000415387 433 ntTSL 3 BASIC3.2□□□□□ -1.9
LCMT2O60294 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC3.2□□□□□ -1.9
LCMT2O60294 DUTP6-201ENST00000425573 462 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 ATP6V0E1P4-201ENST00000427294 242 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.2□□□□□ -1.9
LCMT2O60294 HIGD1AP11-201ENST00000438361 280 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 NAALADL2-AS3-202ENST00000453180 413 ntTSL 3 BASIC3.2□□□□□ -1.9
LCMT2O60294 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.2□□□□□ -1.9
LCMT2O60294 ARPC3P2-201ENST00000457786 533 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 RPL23AP67-201ENST00000465341 474 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LCMT2O60294 RPL21P13-201ENST00000488305 481 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AC096751.1-202ENST00000502691 1067 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AC010273.1-201ENST00000504129 946 ntTSL 5 BASIC3.2□□□□□ -1.9
LCMT2O60294 AC021678.1-201ENST00000505195 936 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC3.2□□□□□ -1.9
LCMT2O60294 AC107934.2-201ENST00000518653 310 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC3.2□□□□□ -1.9
LCMT2O60294 IGHV3-76-201ENST00000522465 295 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
LCMT2O60294 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.2□□□□□ -1.9
LCMT2O60294 NCAPGP2-201ENST00000557911 754 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
LCMT2O60294 AL132657.2-201ENST00000564417 358 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 SNORD84-203ENST00000584275 78 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AP001269.3-201ENST00000588718 329 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AP001330.4-201ENST00000604350 154 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AL450336.1-201ENST00000605180 586 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AL159169.3-201ENST00000608871 561 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AC099778.2-201ENST00000610904 211 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AC005332.6-201ENST00000613178 446 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AC107075.1-201ENST00000613695 314 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AL110115.1-201ENST00000614396 364 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AC091046.2-201ENST00000620775 665 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AL356321.1-201ENST00000621360 228 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AL360181.4-201ENST00000621752 134 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 AP001002.2-201ENST00000625137 386 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LCMT2O60294 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
LCMT2O60294 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.2□□□□□ -1.9
LCMT2O60294 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
LCMT2O60294 AC099786.3-201ENST00000565735 1410 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LCMT2O60294 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LCMT2O60294 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LCMT2O60294 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.19□□□□□ -1.9
LCMT2O60294 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.19□□□□□ -1.9
LCMT2O60294 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LCMT2O60294 RNU1-70P-201ENST00000362618 164 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LCMT2O60294 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LCMT2O60294 MIR7-3-201ENST00000384898 110 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 U3.29-201ENST00000391296 212 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 DEFB116-201ENST00000400549 309 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LCMT2O60294 MOB4-205ENST00000409916 829 ntTSL 3 BASIC3.19□□□□□ -1.9
LCMT2O60294 AC068533.2-201ENST00000411872 306 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AC092447.6-201ENST00000414578 210 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 OR1AA1P-201ENST00000419597 916 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.19□□□□□ -1.9
LCMT2O60294 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.19□□□□□ -1.9
LCMT2O60294 RPL23AP82-202ENST00000427528 469 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC3.19□□□□□ -1.9
LCMT2O60294 Z80107.1-201ENST00000436830 412 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.19□□□□□ -1.9
LCMT2O60294 AC007327.1-201ENST00000447461 264 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.19□□□□□ -1.9
LCMT2O60294 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LCMT2O60294 BTF3P5-201ENST00000457252 467 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 USP9YP25-201ENST00000457708 443 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 CENPBD1P1-201ENST00000464061 469 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AC021205.2-201ENST00000480069 347 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC3.19□□□□□ -1.9
LCMT2O60294 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
LCMT2O60294 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.19□□□□□ -1.9
LCMT2O60294 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.19□□□□□ -1.9
LCMT2O60294 SNRPGP16-201ENST00000533275 226 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AC005832.3-201ENST00000537929 631 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.19□□□□□ -1.9
LCMT2O60294 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.19□□□□□ -1.9
LCMT2O60294 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.19□□□□□ -1.9
LCMT2O60294 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.19□□□□□ -1.9
LCMT2O60294 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC3.19□□□□□ -1.9
LCMT2O60294 AL390838.2-201ENST00000602394 274 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AC012669.1-201ENST00000603209 283 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 ELOCP35-201ENST00000604289 336 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AC021749.1-201ENST00000604322 607 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AL162713.1-201ENST00000604480 262 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC3.19□□□□□ -1.9
LCMT2O60294 VIS1.1-201ENST00000610517 203 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AL355810.1-201ENST00000614629 552 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC3.19□□□□□ -1.9
LCMT2O60294 AC022509.4-201ENST00000621404 572 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 AC244100.1-202ENST00000621554 382 ntBASIC3.19□□□□□ -1.9
LCMT2O60294 TRIQK-201ENST00000378861 1596 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
LCMT2O60294 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 121.4 ms