Protein–RNA interactions for Protein: O60232

SSSCA1, Sjoegren syndrome/scleroderma autoantigen 1, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1O60232 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC1.79□□□□□ -2.12
SSSCA1O60232 RNA5SP138-201ENST00000365098 114 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 OR1A2-201ENST00000381951 930 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SSSCA1O60232 RNU6ATAC34P-201ENST00000408879 121 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 RNA5SP338-201ENST00000410495 85 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 HMGB3P2-201ENST00000411913 584 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC1.79□□□□□ -2.12
SSSCA1O60232 HMGB1P11-201ENST00000413899 637 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 MTCYBP24-201ENST00000420387 1106 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC1.79□□□□□ -2.12
SSSCA1O60232 NANOGP5-201ENST00000424456 877 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SSSCA1O60232 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SSSCA1O60232 C4orf45-201ENST00000434826 1215 ntAPPRIS P1 TSL 2 BASIC1.79□□□□□ -2.12
SSSCA1O60232 AL021397.1-201ENST00000451806 248 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.79□□□□□ -2.12
SSSCA1O60232 SYPL1P1-201ENST00000473622 768 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC1.79□□□□□ -2.12
SSSCA1O60232 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC1.79□□□□□ -2.12
SSSCA1O60232 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC1.79□□□□□ -2.12
SSSCA1O60232 RNU1-40P-201ENST00000516816 164 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 RNU1-97P-201ENST00000516872 164 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC1.79□□□□□ -2.12
SSSCA1O60232 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC1.79□□□□□ -2.12
SSSCA1O60232 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC1.79□□□□□ -2.12
SSSCA1O60232 MIR5007-201ENST00000583098 95 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 GLUD1P4-201ENST00000590914 418 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 AC006023.1-201ENST00000603944 259 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 AC090525.3-201ENST00000605601 189 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 AC107294.1-201ENST00000609524 467 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 AC046143.2-201ENST00000609789 160 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 MIR7973-1-201ENST00000614683 76 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC1.79□□□□□ -2.12
SSSCA1O60232 AC011460.1-201ENST00000636268 1834 ntBASIC1.79□□□□□ -2.12
SSSCA1O60232 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC1.79□□□□□ -2.12
SSSCA1O60232 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SSSCA1O60232 Z99496.1-201ENST00000469424 1477 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SSSCA1O60232 ZNF37BP-203ENST00000452306 1352 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC1.78□□□□□ -2.12
SSSCA1O60232 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SSSCA1O60232 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SSSCA1O60232 RNU4-52P-201ENST00000384209 138 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 SNORA67.4-201ENST00000384688 142 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 MIR196B-201ENST00000384852 84 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SSSCA1O60232 GLS-203ENST00000409215 632 ntTSL 4 BASIC1.78□□□□□ -2.12
SSSCA1O60232 CFLAR-AS1-201ENST00000415011 1072 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SSSCA1O60232 MTND1P23-201ENST00000416931 372 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 COTL1P1-201ENST00000422309 375 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 AC019097.1-201ENST00000424783 735 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC1.78□□□□□ -2.12
SSSCA1O60232 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SSSCA1O60232 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC1.78□□□□□ -2.12
SSSCA1O60232 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC1.78□□□□□ -2.12
SSSCA1O60232 RNA5SP310-201ENST00000459084 116 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 AC025033.1-201ENST00000463883 194 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SSSCA1O60232 AC109927.1-202ENST00000511951 282 ntTSL 3 BASIC1.78□□□□□ -2.12
SSSCA1O60232 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC1.78□□□□□ -2.12
SSSCA1O60232 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC1.78□□□□□ -2.12
SSSCA1O60232 SETP12-201ENST00000514068 805 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 SNORA31.20-201ENST00000517111 133 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.12
SSSCA1O60232 UBTFL10-201ENST00000528532 562 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 SDHAF2-205ENST00000537782 559 ntTSL 4 BASIC1.78□□□□□ -2.12
SSSCA1O60232 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC1.78□□□□□ -2.12
SSSCA1O60232 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SSSCA1O60232 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SSSCA1O60232 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC1.78□□□□□ -2.12
SSSCA1O60232 APAF1-207ENST00000547743 651 ntTSL 3 BASIC1.78□□□□□ -2.12
SSSCA1O60232 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC1.78□□□□□ -2.12
SSSCA1O60232 AC121758.2-201ENST00000553271 193 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC1.78□□□□□ -2.12
SSSCA1O60232 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.78□□□□□ -2.12
SSSCA1O60232 MIR4658-201ENST00000584344 65 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 AC002984.1-201ENST00000591692 448 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
SSSCA1O60232 OR2AS2P-201ENST00000606902 342 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 AC092954.1-201ENST00000609121 445 ntBASIC1.78□□□□□ -2.12
SSSCA1O60232 C8orf89-202ENST00000624510 658 ntAPPRIS P2 TSL 3 BASIC1.78□□□□□ -2.12
SSSCA1O60232 PCNP-208ENST00000627393 136 ntTSL 2 BASIC1.78□□□□□ -2.12
SSSCA1O60232 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC1.78□□□□□ -2.12
SSSCA1O60232 RICTOR-202ENST00000357387 9543 ntAPPRIS P1 TSL 1 (best) BASIC1.78□□□□□ -2.13
SSSCA1O60232 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.78□□□□□ -2.13
SSSCA1O60232 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SSSCA1O60232 SCN7A-201ENST00000409855 7183 ntAPPRIS P1 TSL 1 (best) BASIC1.77□□□□□ -2.13
SSSCA1O60232 EYS-202ENST00000342421 2168 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
SSSCA1O60232 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.77□□□□□ -2.13
SSSCA1O60232 RNA5SP160-201ENST00000364866 120 ntBASIC1.77□□□□□ -2.13
SSSCA1O60232 RNU6-1072P-201ENST00000384703 107 ntBASIC1.77□□□□□ -2.13
SSSCA1O60232 RNU6-443P-201ENST00000384780 107 ntBASIC1.77□□□□□ -2.13
SSSCA1O60232 RNU6-244P-201ENST00000391028 104 ntBASIC1.77□□□□□ -2.13
SSSCA1O60232 RNA5SP498-201ENST00000411342 120 ntBASIC1.77□□□□□ -2.13
SSSCA1O60232 RPL26P37-201ENST00000411983 438 ntBASIC1.77□□□□□ -2.13
SSSCA1O60232 Z75741.2-201ENST00000417272 1167 ntBASIC1.77□□□□□ -2.13
SSSCA1O60232 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC1.77□□□□□ -2.13
SSSCA1O60232 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC1.77□□□□□ -2.13
SSSCA1O60232 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.77□□□□□ -2.13
SSSCA1O60232 AL391832.1-201ENST00000423963 423 ntTSL 5 BASIC1.77□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 96.8 ms