Protein–RNA interactions for Protein: O43556

SGCE, Epsilon-sarcoglycan, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SGCEO43556 Z96811.1-201ENST00000445880 108 ntBASIC2.6□□□□□ -1.99
SGCEO43556 AL929288.2-201ENST00000446368 407 ntBASIC2.6□□□□□ -1.99
SGCEO43556 OR6K5P-201ENST00000447050 945 ntBASIC2.6□□□□□ -1.99
SGCEO43556 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC2.6□□□□□ -1.99
SGCEO43556 snoU109.4-201ENST00000458953 143 ntBASIC2.6□□□□□ -1.99
SGCEO43556 SETP11-201ENST00000473027 690 ntBASIC2.6□□□□□ -1.99
SGCEO43556 AC117440.1-201ENST00000474107 571 ntBASIC2.6□□□□□ -1.99
SGCEO43556 RPS17P11-201ENST00000474297 293 ntBASIC2.6□□□□□ -1.99
SGCEO43556 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.6□□□□□ -1.99
SGCEO43556 SNORA31.15-201ENST00000516771 132 ntBASIC2.6□□□□□ -1.99
SGCEO43556 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC2.6□□□□□ -1.99
SGCEO43556 AP002404.1-201ENST00000532005 451 ntBASIC2.6□□□□□ -1.99
SGCEO43556 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC2.6□□□□□ -1.99
SGCEO43556 AC107016.2-201ENST00000547968 190 ntBASIC2.6□□□□□ -1.99
SGCEO43556 LINC02410-201ENST00000553095 393 ntTSL 2 BASIC2.6□□□□□ -1.99
SGCEO43556 AC066613.1-202ENST00000560727 630 ntTSL 5 BASIC2.6□□□□□ -1.99
SGCEO43556 BPTFP1-201ENST00000579209 492 ntBASIC2.6□□□□□ -1.99
SGCEO43556 AC138761.3-201ENST00000579993 334 ntBASIC2.6□□□□□ -1.99
SGCEO43556 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC2.6□□□□□ -1.99
SGCEO43556 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.6□□□□□ -1.99
SGCEO43556 RPL23AP78-201ENST00000599928 470 ntBASIC2.6□□□□□ -1.99
SGCEO43556 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC2.6□□□□□ -1.99
SGCEO43556 AL133507.1-201ENST00000605269 557 ntBASIC2.6□□□□□ -1.99
SGCEO43556 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC2.6□□□□□ -1.99
SGCEO43556 AL513185.3-201ENST00000433335 1300 ntBASIC2.6□□□□□ -1.99
SGCEO43556 AC099654.7-201ENST00000635788 2127 ntBASIC2.6□□□□□ -1.99
SGCEO43556 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.59□□□□□ -1.99
SGCEO43556 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC2.59□□□□□ -1.99
SGCEO43556 RNA5SP374-201ENST00000362939 125 ntBASIC2.59□□□□□ -1.99
SGCEO43556 MIR181B1-201ENST00000385240 110 ntBASIC2.59□□□□□ -1.99
SGCEO43556 ATF1P1-201ENST00000406040 927 ntBASIC2.59□□□□□ -1.99
SGCEO43556 SNORA11-201ENST00000408789 128 ntBASIC2.59□□□□□ -1.99
SGCEO43556 AC092638.1-201ENST00000411966 1275 ntBASIC2.59□□□□□ -1.99
SGCEO43556 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC2.59□□□□□ -1.99
SGCEO43556 HMGN2P30-201ENST00000423237 256 ntBASIC2.59□□□□□ -1.99
SGCEO43556 RPL23AP16-201ENST00000441715 421 ntBASIC2.59□□□□□ -1.99
SGCEO43556 PABPC1P3-201ENST00000469174 459 ntBASIC2.59□□□□□ -1.99
SGCEO43556 MTND3P24-201ENST00000506306 329 ntBASIC2.59□□□□□ -1.99
SGCEO43556 AC009901.1-201ENST00000506703 541 ntBASIC2.59□□□□□ -1.99
SGCEO43556 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC2.59□□□□□ -1.99
SGCEO43556 AC009812.2-201ENST00000517657 457 ntBASIC2.59□□□□□ -1.99
SGCEO43556 ZNF705CP-201ENST00000530515 889 ntBASIC2.59□□□□□ -1.99
SGCEO43556 OR4P1P-201ENST00000530808 1136 ntBASIC2.59□□□□□ -1.99
SGCEO43556 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC2.59□□□□□ -1.99
SGCEO43556 ATF7IP2-206ENST00000543967 998 ntTSL 2 BASIC2.59□□□□□ -1.99
SGCEO43556 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.59□□□□□ -1.99
SGCEO43556 EEF1B2P4-201ENST00000551398 348 ntBASIC2.59□□□□□ -1.99
SGCEO43556 NBEAP1-201ENST00000554452 979 ntBASIC2.59□□□□□ -1.99
SGCEO43556 MED28P6-201ENST00000558776 231 ntBASIC2.59□□□□□ -1.99
SGCEO43556 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
SGCEO43556 AC012493.2-201ENST00000595083 291 ntBASIC2.59□□□□□ -1.99
SGCEO43556 AC006539.2-201ENST00000601729 572 ntBASIC2.59□□□□□ -1.99
SGCEO43556 AC007179.3-201ENST00000604976 235 ntBASIC2.59□□□□□ -1.99
SGCEO43556 AC079228.1-201ENST00000624774 1049 ntBASIC2.59□□□□□ -1.99
SGCEO43556 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC2.59□□□□□ -1.99
SGCEO43556 ZNF85-203ENST00000345030 1689 ntAPPRIS ALT2 TSL 5 BASIC2.59□□□□□ -2
SGCEO43556 CPD-202ENST00000543464 4007 ntTSL 2 BASIC2.59□□□□□ -2
SGCEO43556 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC2.59□□□□□ -2
SGCEO43556 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.59□□□□□ -2
SGCEO43556 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.58□□□□□ -2
SGCEO43556 GTPBP8-205ENST00000473129 1518 ntTSL 2 BASIC2.58□□□□□ -2
SGCEO43556 AL035425.3-201ENST00000564206 4996 ntBASIC2.58□□□□□ -2
SGCEO43556 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SGCEO43556 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC2.58□□□□□ -2
SGCEO43556 SNORA9.2-201ENST00000365361 133 ntBASIC2.58□□□□□ -2
SGCEO43556 SNORD82-201ENST00000365530 70 ntBASIC2.58□□□□□ -2
SGCEO43556 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.58□□□□□ -2
SGCEO43556 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
SGCEO43556 SLC9B1P2-201ENST00000398120 1184 ntBASIC2.58□□□□□ -2
SGCEO43556 RNU6ATAC10P-201ENST00000408635 111 ntBASIC2.58□□□□□ -2
SGCEO43556 AL133384.1-201ENST00000412744 351 ntBASIC2.58□□□□□ -2
SGCEO43556 OR51A3P-201ENST00000413596 924 ntBASIC2.58□□□□□ -2
SGCEO43556 AC007161.1-201ENST00000418534 1061 ntTSL 3 BASIC2.58□□□□□ -2
SGCEO43556 AL645937.1-202ENST00000421799 937 ntBASIC2.58□□□□□ -2
SGCEO43556 AC022018.1-201ENST00000430685 241 ntBASIC2.58□□□□□ -2
SGCEO43556 MTND4LP7-201ENST00000431728 294 ntBASIC2.58□□□□□ -2
SGCEO43556 MTND4LP10-201ENST00000435146 291 ntBASIC2.58□□□□□ -2
SGCEO43556 AC095032.1-201ENST00000444810 527 ntTSL 3 BASIC2.58□□□□□ -2
SGCEO43556 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.58□□□□□ -2
SGCEO43556 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.58□□□□□ -2
SGCEO43556 AC034236.1-201ENST00000469891 373 ntBASIC2.58□□□□□ -2
SGCEO43556 RPL23AP11-201ENST00000475260 469 ntBASIC2.58□□□□□ -2
SGCEO43556 CAB39P1-201ENST00000502277 460 ntBASIC2.58□□□□□ -2
SGCEO43556 AIG1P1-201ENST00000503376 148 ntBASIC2.58□□□□□ -2
SGCEO43556 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC2.58□□□□□ -2
SGCEO43556 CBX3P3-201ENST00000508108 532 ntBASIC2.58□□□□□ -2
SGCEO43556 LINC00535-204ENST00000520513 305 ntTSL 3 BASIC2.58□□□□□ -2
SGCEO43556 FAM60DP-201ENST00000524174 632 ntBASIC2.58□□□□□ -2
SGCEO43556 OR5G4P-201ENST00000525251 760 ntBASIC2.58□□□□□ -2
SGCEO43556 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.58□□□□□ -2
SGCEO43556 AP002004.1-207ENST00000531371 526 ntTSL 1 (best) BASIC2.58□□□□□ -2
SGCEO43556 ELOCP31-201ENST00000540463 467 ntBASIC2.58□□□□□ -2
SGCEO43556 AC004486.1-201ENST00000546846 233 ntBASIC2.58□□□□□ -2
SGCEO43556 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.58□□□□□ -2
SGCEO43556 H3F3AP1-201ENST00000559984 334 ntBASIC2.58□□□□□ -2
SGCEO43556 AC012669.1-201ENST00000603209 283 ntBASIC2.58□□□□□ -2
SGCEO43556 AC096577.2-201ENST00000611455 153 ntBASIC2.58□□□□□ -2
SGCEO43556 RMST_10.1-201ENST00000616309 154 ntBASIC2.58□□□□□ -2
SGCEO43556 AC009318.4-201ENST00000620496 486 ntBASIC2.58□□□□□ -2
SGCEO43556 BX649567.1-201ENST00000642071 1134 ntBASIC2.58□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms