Protein–RNA interactions for Protein: O15551

CLDN3, Claudin-3, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN3O15551 AL110115.1-201ENST00000614396 364 ntBASIC3.39□□□□□ -1.87
CLDN3O15551 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.39□□□□□ -1.87
CLDN3O15551 Z99496.1-201ENST00000469424 1477 ntBASIC3.39□□□□□ -1.87
CLDN3O15551 AC002546.1-201ENST00000588041 2504 ntBASIC3.39□□□□□ -1.87
CLDN3O15551 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN3O15551 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
CLDN3O15551 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN3O15551 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN3O15551 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN3O15551 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN3O15551 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN3O15551 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN3O15551 ZBTB20-201ENST00000357258 27125 ntAPPRIS P1 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN3O15551 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN3O15551 MIR422A-201ENST00000362286 90 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN3O15551 ARF4P3-201ENST00000397387 509 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 AC110754.1-201ENST00000399740 601 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 HMGB3P23-201ENST00000414981 585 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN3O15551 FTH1P1-201ENST00000437933 532 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN3O15551 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC3.38□□□□□ -1.87
CLDN3O15551 snoU109.4-201ENST00000458953 143 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 AC092757.1-201ENST00000467293 467 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
CLDN3O15551 SNORA74D-201ENST00000516404 141 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC3.38□□□□□ -1.87
CLDN3O15551 AC093331.1-201ENST00000521474 169 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.38□□□□□ -1.87
CLDN3O15551 MTCO3P15-201ENST00000526563 574 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN3O15551 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.38□□□□□ -1.87
CLDN3O15551 FAM60BP-201ENST00000578364 658 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.38□□□□□ -1.87
CLDN3O15551 AL592148.2-201ENST00000612210 372 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 AC109454.4-201ENST00000623411 649 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 AP001002.2-201ENST00000625137 386 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.38□□□□□ -1.87
CLDN3O15551 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
CLDN3O15551 MTND5P24-201ENST00000438892 1767 ntBASIC3.38□□□□□ -1.87
CLDN3O15551 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.37□□□□□ -1.87
CLDN3O15551 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN3O15551 ZNF280C-201ENST00000370978 4634 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN3O15551 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN3O15551 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CLDN3O15551 RNU6-236P-201ENST00000363886 106 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 MIR483-201ENST00000385070 76 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 SNORA48.8-201ENST00000391324 134 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 RPL7P25-201ENST00000404151 721 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN3O15551 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC3.37□□□□□ -1.87
CLDN3O15551 AC011242.1-201ENST00000433596 1158 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 HIGD1AP11-201ENST00000438361 280 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 NDUFAF4P2-201ENST00000445374 520 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 VN1R10P-201ENST00000447106 875 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 RPL27AP5-201ENST00000469428 449 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 OR4G11P-201ENST00000492842 939 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 AC008885.1-201ENST00000514930 301 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 SNORA31.8-201ENST00000516327 108 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 AC027309.2-201ENST00000520566 192 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 PSMA2P1-201ENST00000526365 646 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN3O15551 AC018630.1-201ENST00000541376 925 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 GTF2IP8-201ENST00000560687 584 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 LARP7P2-201ENST00000575306 125 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 AC090666.1-201ENST00000578241 445 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN3O15551 AC008739.1-201ENST00000598137 575 ntTSL 2 BASIC3.37□□□□□ -1.87
CLDN3O15551 AC006539.2-201ENST00000601729 572 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 AC068831.7-201ENST00000616954 363 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 AL512427.1-201ENST00000618593 349 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 PEX3-201ENST00000367591 1969 ntAPPRIS P1 TSL 1 (best) BASIC3.37□□□□□ -1.87
CLDN3O15551 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
CLDN3O15551 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN3O15551 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.37□□□□□ -1.87
CLDN3O15551 EFTUD1P2-201ENST00000514817 1603 ntBASIC3.37□□□□□ -1.87
CLDN3O15551 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.36□□□□□ -1.87
CLDN3O15551 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC3.36□□□□□ -1.87
CLDN3O15551 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN3O15551 AC011124.1-201ENST00000521221 1762 ntTSL 2 BASIC3.36□□□□□ -1.87
CLDN3O15551 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CLDN3O15551 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.36□□□□□ -1.87
CLDN3O15551 OR5H2-201ENST00000355273 945 ntBASIC3.36□□□□□ -1.87
CLDN3O15551 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.36□□□□□ -1.87
CLDN3O15551 U3.6-201ENST00000363622 211 ntBASIC3.36□□□□□ -1.87
CLDN3O15551 SUGT1P1-201ENST00000379514 476 ntBASIC3.36□□□□□ -1.87
CLDN3O15551 SNORD67-201ENST00000390833 111 ntBASIC3.36□□□□□ -1.87
CLDN3O15551 CYCSP45-201ENST00000402289 315 ntBASIC3.36□□□□□ -1.87
CLDN3O15551 RN7SKP220-201ENST00000410611 288 ntBASIC3.36□□□□□ -1.87
CLDN3O15551 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN3O15551 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.36□□□□□ -1.87
CLDN3O15551 MTCO1P3-201ENST00000429327 192 ntBASIC3.36□□□□□ -1.87
CLDN3O15551 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC3.36□□□□□ -1.87
CLDN3O15551 SEPT7P5-201ENST00000434048 306 ntBASIC3.36□□□□□ -1.87
CLDN3O15551 AP000949.1-201ENST00000438328 629 ntBASIC3.36□□□□□ -1.87
CLDN3O15551 AC093155.1-201ENST00000440164 826 ntBASIC3.36□□□□□ -1.87
CLDN3O15551 CYCSP32-201ENST00000440548 321 ntBASIC3.36□□□□□ -1.87
CLDN3O15551 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC3.36□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 93.9 ms