Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX1O00570 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
SOX1O00570 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.47□□□□□ -1.53
SOX1O00570 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.47□□□□□ -1.53
SOX1O00570 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.46□□□□□ -1.53
SOX1O00570 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SOX1O00570 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC5.46□□□□□ -1.53
SOX1O00570 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SOX1O00570 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX1O00570 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC5.46□□□□□ -1.54
SOX1O00570 BLZF1-203ENST00000367808 2749 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX1O00570 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX1O00570 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.46□□□□□ -1.54
SOX1O00570 CYP7A1-201ENST00000301645 2950 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX1O00570 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SOX1O00570 RNU6-1115P-201ENST00000362490 106 ntBASIC5.46□□□□□ -1.54
SOX1O00570 SNORD115-7-201ENST00000365306 82 ntBASIC5.46□□□□□ -1.54
SOX1O00570 TRAV26-2-201ENST00000390460 327 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
SOX1O00570 RPL23AP17-201ENST00000401064 499 ntBASIC5.46□□□□□ -1.54
SOX1O00570 OFD1P1Y-201ENST00000411756 1225 ntBASIC5.46□□□□□ -1.54
SOX1O00570 HMGB3P2-201ENST00000411913 584 ntBASIC5.46□□□□□ -1.54
SOX1O00570 RNF10P1-201ENST00000418589 369 ntBASIC5.46□□□□□ -1.54
SOX1O00570 AL356134.1-201ENST00000419815 373 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX1O00570 RPS12P10-201ENST00000427031 377 ntBASIC5.46□□□□□ -1.54
SOX1O00570 OR4C10P-201ENST00000434991 931 ntBASIC5.46□□□□□ -1.54
SOX1O00570 AL357873.1-201ENST00000449215 282 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX1O00570 RN7SL809P-201ENST00000482040 297 ntBASIC5.46□□□□□ -1.54
SOX1O00570 AC015911.1-201ENST00000495111 156 ntBASIC5.46□□□□□ -1.54
SOX1O00570 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX1O00570 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX1O00570 AP001972.1-201ENST00000529215 506 ntTSL 2 BASIC5.46□□□□□ -1.54
SOX1O00570 AC025265.1-201ENST00000551299 497 ntTSL 3 BASIC5.46□□□□□ -1.54
SOX1O00570 OR11H5P-201ENST00000554039 926 ntBASIC5.46□□□□□ -1.54
SOX1O00570 HMGN2P47-201ENST00000559378 272 ntBASIC5.46□□□□□ -1.54
SOX1O00570 MIR5583-1-201ENST00000580941 59 ntBASIC5.46□□□□□ -1.54
SOX1O00570 AC092747.3-201ENST00000603769 301 ntBASIC5.46□□□□□ -1.54
SOX1O00570 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC5.46□□□□□ -1.54
SOX1O00570 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX1O00570 AL162373.1-201ENST00000620433 407 ntBASIC5.46□□□□□ -1.54
SOX1O00570 MIR6075-201ENST00000620782 95 ntBASIC5.46□□□□□ -1.54
SOX1O00570 RNA5SP196-201ENST00000625967 102 ntBASIC5.46□□□□□ -1.54
SOX1O00570 SPATA1-206ENST00000490879 2888 ntAPPRIS P1 TSL 5 BASIC5.46□□□□□ -1.54
SOX1O00570 RIMS2-209ENST00000507740 8002 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
SOX1O00570 ZEB1-202ENST00000361642 5990 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
SOX1O00570 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.46□□□□□ -1.54
SOX1O00570 AC099654.2-201ENST00000433031 1980 ntBASIC5.46□□□□□ -1.54
SOX1O00570 BDP1P-201ENST00000582658 1990 ntBASIC5.46□□□□□ -1.54
SOX1O00570 MSL3P1-202ENST00000440028 1468 ntBASIC5.45□□□□□ -1.54
SOX1O00570 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC5.45□□□□□ -1.54
SOX1O00570 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX1O00570 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC5.45□□□□□ -1.54
SOX1O00570 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SOX1O00570 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX1O00570 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SOX1O00570 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.45□□□□□ -1.54
SOX1O00570 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX1O00570 RNU6-1243P-201ENST00000364028 107 ntBASIC5.45□□□□□ -1.54
SOX1O00570 SNORD46.1-201ENST00000364139 104 ntBASIC5.45□□□□□ -1.54
SOX1O00570 SNORD113.2-201ENST00000364166 89 ntBASIC5.45□□□□□ -1.54
SOX1O00570 RNU6-593P-201ENST00000364716 112 ntBASIC5.45□□□□□ -1.54
SOX1O00570 RNA5-8SP5-201ENST00000365304 152 ntBASIC5.45□□□□□ -1.54
SOX1O00570 SNORD82-201ENST00000365530 70 ntBASIC5.45□□□□□ -1.54
SOX1O00570 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SOX1O00570 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
SOX1O00570 SNORD3H-201ENST00000384486 214 ntBASIC5.45□□□□□ -1.54
SOX1O00570 RNU6-1222P-201ENST00000384615 107 ntBASIC5.45□□□□□ -1.54
SOX1O00570 AL136372.1-201ENST00000403060 228 ntBASIC5.45□□□□□ -1.54
SOX1O00570 Y_RNA.646-201ENST00000410980 101 ntBASIC5.45□□□□□ -1.54
SOX1O00570 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC5.45□□□□□ -1.54
SOX1O00570 CRIP1P1-201ENST00000427567 185 ntBASIC5.45□□□□□ -1.54
SOX1O00570 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.45□□□□□ -1.54
SOX1O00570 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC5.45□□□□□ -1.54
SOX1O00570 H3F3BP1-201ENST00000440551 403 ntBASIC5.45□□□□□ -1.54
SOX1O00570 FHP1-201ENST00000442741 703 ntBASIC5.45□□□□□ -1.54
SOX1O00570 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC5.45□□□□□ -1.54
SOX1O00570 AC016696.1-201ENST00000446949 318 ntBASIC5.45□□□□□ -1.54
SOX1O00570 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC5.45□□□□□ -1.54
SOX1O00570 FAM60DP-201ENST00000524174 632 ntBASIC5.45□□□□□ -1.54
SOX1O00570 AC137627.1-201ENST00000545761 289 ntBASIC5.45□□□□□ -1.54
SOX1O00570 AC079598.1-201ENST00000548691 554 ntTSL 4 BASIC5.45□□□□□ -1.54
SOX1O00570 MYL12BP1-201ENST00000569826 507 ntBASIC5.45□□□□□ -1.54
SOX1O00570 RN7SL802P-201ENST00000577858 299 ntBASIC5.45□□□□□ -1.54
SOX1O00570 NANOGP3-201ENST00000605855 286 ntBASIC5.45□□□□□ -1.54
SOX1O00570 AC023043.4-201ENST00000612081 449 ntBASIC5.45□□□□□ -1.54
SOX1O00570 AL590099.1-201ENST00000615276 138 ntBASIC5.45□□□□□ -1.54
SOX1O00570 AL445567.2-201ENST00000618935 498 ntBASIC5.45□□□□□ -1.54
SOX1O00570 AL357559.1-201ENST00000622228 274 ntBASIC5.45□□□□□ -1.54
SOX1O00570 AC091953.5-201ENST00000622919 233 ntBASIC5.45□□□□□ -1.54
SOX1O00570 AC055839.1-201ENST00000634467 498 ntBASIC5.45□□□□□ -1.54
SOX1O00570 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC5.45□□□□□ -1.54
SOX1O00570 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX1O00570 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.45□□□□□ -1.54
SOX1O00570 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC5.45□□□□□ -1.54
SOX1O00570 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
SOX1O00570 AP000756.2-201ENST00000624168 2567 ntBASIC5.45□□□□□ -1.54
SOX1O00570 SGIP1-201ENST00000237247 3997 ntAPPRIS ALT2 TSL 5 BASIC5.45□□□□□ -1.54
SOX1O00570 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC5.45□□□□□ -1.54
SOX1O00570 KIAA1841-205ENST00000453873 4294 ntAPPRIS P1 TSL 5 BASIC5.45□□□□□ -1.54
SOX1O00570 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
SOX1O00570 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.44□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 80.8 ms