Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 AP000907.2-201ENST00000530827 353 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 AC022240.1-201ENST00000532065 684 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FOXN3O00409 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.4□□□□□ -1.71
FOXN3O00409 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC4.4□□□□□ -1.71
FOXN3O00409 ZNF415P1-201ENST00000582279 1166 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXN3O00409 AC015871.2-201ENST00000603605 948 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.4□□□□□ -1.71
FOXN3O00409 AC009509.4-201ENST00000619202 509 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 AL356585.4-201ENST00000623078 1229 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 MIR7641-1-201ENST00000627518 61 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXN3O00409 TRDN-206ENST00000628709 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXN3O00409 AC244517.1-201ENST00000606030 2086 ntBASIC4.4□□□□□ -1.71
FOXN3O00409 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC4.4□□□□□ -1.71
FOXN3O00409 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXN3O00409 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
FOXN3O00409 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.4□□□□□ -1.71
FOXN3O00409 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC4.4□□□□□ -1.71
FOXN3O00409 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.4□□□□□ -1.71
FOXN3O00409 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.4□□□□□ -1.71
FOXN3O00409 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXN3O00409 SLC15A5-201ENST00000344941 2923 ntAPPRIS P1 TSL 5 BASIC4.39□□□□□ -1.71
FOXN3O00409 AC110760.2-201ENST00000508031 2546 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXN3O00409 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXN3O00409 MFF-206ENST00000392059 1710 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXN3O00409 MIR383-201ENST00000362257 73 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.39□□□□□ -1.71
FOXN3O00409 SNORA75-201ENST00000384158 137 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 AL663109.1-201ENST00000411498 844 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 AL365356.1-201ENST00000411512 736 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXN3O00409 CDK8P2-201ENST00000415020 547 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 SPA17P1-201ENST00000416656 452 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXN3O00409 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXN3O00409 TEX41-204ENST00000423031 491 ntTSL 4 BASIC4.39□□□□□ -1.71
FOXN3O00409 RPL18P10-201ENST00000425606 538 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXN3O00409 EZH2P1-201ENST00000431167 291 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 LINC01807-201ENST00000432481 676 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXN3O00409 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXN3O00409 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXN3O00409 AL138799.3-201ENST00000438968 350 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 AC108734.1-201ENST00000439549 399 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 AL353748.1-201ENST00000440753 474 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 FABP3P2-201ENST00000453169 399 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 AL033528.1-201ENST00000453780 140 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 AL445524.1-204ENST00000454631 458 ntTSL 3 BASIC4.39□□□□□ -1.71
FOXN3O00409 RPL36AP13-201ENST00000457490 317 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 SRRM1P2-201ENST00000464531 1192 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 UQCRHP4-201ENST00000471686 272 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 TMED11P-201ENST00000479478 690 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 AC105137.1-201ENST00000484355 562 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 KLHL6-AS1-201ENST00000491676 503 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXN3O00409 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXN3O00409 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.39□□□□□ -1.71
FOXN3O00409 NDUFB4P9-201ENST00000511646 388 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 RNU2-58P-201ENST00000516403 183 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 RNU6-798P-201ENST00000516912 103 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC4.39□□□□□ -1.71
FOXN3O00409 AC022878.1-201ENST00000530684 149 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC4.39□□□□□ -1.71
FOXN3O00409 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC4.39□□□□□ -1.71
FOXN3O00409 AL157394.1-201ENST00000562983 1224 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC4.39□□□□□ -1.71
FOXN3O00409 RN7SL600P-201ENST00000581811 299 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 AC090616.5-202ENST00000582111 297 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXN3O00409 AC007687.1-201ENST00000602704 304 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 AC008638.3-201ENST00000603341 463 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 AC098614.4-201ENST00000607601 462 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 MIR7151-201ENST00000617477 60 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 THRA1/BTR-204ENST00000621191 513 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXN3O00409 AC010149.2-201ENST00000637608 315 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 MTCO1P9-201ENST00000505577 1534 ntBASIC4.39□□□□□ -1.71
FOXN3O00409 TM4SF18-201ENST00000296059 3852 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXN3O00409 EFHC1-205ENST00000538167 5308 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXN3O00409 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC4.39□□□□□ -1.71
FOXN3O00409 FKTN-201ENST00000223528 7364 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXN3O00409 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC4.39□□□□□ -1.71
FOXN3O00409 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 AC066616.2-201ENST00000559334 1481 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 LINC02120-201ENST00000505518 2008 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 POSTN-202ENST00000379743 3196 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 EIF3E-201ENST00000220849 1543 ntAPPRIS P1 TSL 1 (best) BASIC4.38□□□□□ -1.71
FOXN3O00409 RNY4P24-201ENST00000362735 96 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 RNA5SP235-201ENST00000365411 114 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC4.38□□□□□ -1.71
FOXN3O00409 Y_RNA.517-201ENST00000384551 106 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 RPS3AP36-201ENST00000398190 775 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 SNORA3C-201ENST00000408792 125 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 Y_RNA.608-201ENST00000410647 95 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.38□□□□□ -1.71
FOXN3O00409 AL807761.1-201ENST00000417622 171 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AL137014.1-201ENST00000420490 1226 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.38□□□□□ -1.71
FOXN3O00409 AC244098.2-201ENST00000422068 99 ntBASIC4.38□□□□□ -1.71
FOXN3O00409 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 90.9 ms