Protein–RNA interactions for Protein: C9J1S8

TRIM49D1, Tripartite motif-containing protein 49D, humanhuman

Predictions only

Length 452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1C9J1S8 AL606834.2-201ENST00000602954 668 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC091488.1-201ENST00000604239 660 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 ELOCP35-201ENST00000604289 336 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC013244.3-201ENST00000605614 388 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC110609.1-201ENST00000608228 303 ntTSL 3 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AL138478.1-201ENST00000612252 832 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC107871.2-201ENST00000612894 502 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 DLEU1_1.1-201ENST00000618107 190 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC011330.2-201ENST00000621680 635 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AC009039.2-201ENST00000624524 529 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 AL035425.3-201ENST00000564206 4996 ntBASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 ZNF676-201ENST00000397121 2944 ntAPPRIS P1 TSL 2 BASIC2.95□□□□□ -1.94
TRIM49D1C9J1S8 ASNSP3-201ENST00000451989 1306 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AL049737.1-201ENST00000413920 1403 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 CCDC82-201ENST00000278520 2941 ntAPPRIS P2 TSL 5 BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AC010733.2-201ENST00000589496 5702 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 RNA5SP295-201ENST00000362655 121 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 RNU6-582P-201ENST00000362989 107 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 RNU6-236P-201ENST00000363886 106 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 RNA5SP387-201ENST00000364226 106 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 RNU4-68P-201ENST00000364314 141 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 RNA5SP72-201ENST00000364442 117 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 MIR181A2-201ENST00000384863 110 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 MIR591-201ENST00000385290 95 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AL590004.2-201ENST00000404787 371 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AL136310.1-201ENST00000404926 654 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 RNU6-272P-201ENST00000411028 104 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 RNA5SP344-201ENST00000411081 104 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AL513175.2-201ENST00000422071 443 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AL353678.1-201ENST00000422735 741 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 RPL7P44-201ENST00000424827 742 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 RPP40P1-201ENST00000426762 456 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 MTATP6P17-201ENST00000431030 672 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 VDAC1P3-201ENST00000434069 851 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 RPL23AP33-201ENST00000442301 452 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AL589880.1-201ENST00000448271 287 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AL162389.1-201ENST00000449233 177 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AL356270.1-201ENST00000456587 522 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AC092754.2-201ENST00000463506 460 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AC117440.1-201ENST00000474107 571 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 RPL21P131-201ENST00000497298 483 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AC021146.8-201ENST00000507455 733 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AC008885.2-201ENST00000509506 930 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AC074250.1-201ENST00000511117 192 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 RN7SKP287-201ENST00000516546 266 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AC026407.1-201ENST00000518369 204 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 HMGB1P1-201ENST00000522557 636 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AP001207.1-201ENST00000524051 481 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AADACP1-206ENST00000561502 1193 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 MIR4666A-201ENST00000580160 79 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AC118755.2-201ENST00000584676 212 ntTSL 3 BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AC011468.4-201ENST00000603942 409 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AC007179.3-201ENST00000604976 235 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AC093424.1-201ENST00000604999 338 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AL139344.1-201ENST00000605228 195 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 CEP164P1-207ENST00000608660 504 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AC109809.1-201ENST00000619665 545 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 Z99129.2-201ENST00000619967 314 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AC097520.1-201ENST00000624435 385 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 MFSD8-245ENST00000641743 948 ntBASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 NXPE1-204ENST00000536271 2289 ntTSL 1 (best) BASIC2.94□□□□□ -1.94
TRIM49D1C9J1S8 AC109315.1-201ENST00000584143 1347 ntBASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 SGO1P1-201ENST00000603525 1447 ntBASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 AL161431.1-201ENST00000618966 4205 ntBASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 AC022031.1-201ENST00000585985 2593 ntBASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 MTCO1P24-201ENST00000515438 1558 ntBASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 ZNF876P-202ENST00000398732 1485 ntBASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 RNU6-549P-201ENST00000384433 107 ntBASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 RNU6-636P-201ENST00000384598 107 ntBASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 RNVU1-14-201ENST00000384770 164 ntBASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 AGR3-202ENST00000402239 563 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 ERHP2-201ENST00000402323 299 ntBASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 SNORD88.1-201ENST00000408684 91 ntBASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 FCF1P2-201ENST00000415284 583 ntBASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 VPS26BP1-201ENST00000417155 755 ntBASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 ELOCP9-201ENST00000418624 239 ntBASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 AC005005.2-201ENST00000420779 380 ntBASIC2.93□□□□□ -1.94
TRIM49D1C9J1S8 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Retrieved 100 of 98,524 protein–RNA pairs in 87.7 ms