Protein–RNA interactions for Protein: A6NMK7

CPSF4L, Putative cleavage and polyadenylation specificity factor subunit 4-like protein, humanhuman

Known RBP Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4LA6NMK7 NF1P10-201ENST00000613227 742 ntBASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 AC123768.3-201ENST00000613733 523 ntTSL 3 BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 AL590808.1-201ENST00000618696 141 ntBASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 AC068544.1-201ENST00000635064 248 ntTSL 5 BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 ELF2P3-201ENST00000445099 1506 ntBASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 AC025125.1-201ENST00000624743 1922 ntBASIC1.74□□□□□ -2.13
CPSF4LA6NMK7 ZBBX-205ENST00000455345 3185 ntAPPRIS ALT2 TSL 1 (best) BASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 AL139276.1-201ENST00000311910 1001 ntBASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 SNORA31-201ENST00000362607 130 ntBASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 MIR634-201ENST00000385208 97 ntBASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 AL590290.1-201ENST00000405336 380 ntBASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 AL513331.1-201ENST00000411908 397 ntBASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 TEX41-204ENST00000423031 491 ntTSL 4 BASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 AL138789.1-201ENST00000425820 960 ntTSL 2 BASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 RPL7P36-201ENST00000444633 681 ntBASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 KLHL2P1-201ENST00000508691 521 ntBASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 ANP32BP3-201ENST00000559213 706 ntBASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 AC036222.2-201ENST00000579033 333 ntTSL 3 BASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 MIR4474-201ENST00000579189 78 ntBASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 MIR4435-1-201ENST00000582552 80 ntBASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 MIR4448-201ENST00000584360 86 ntBASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 AC068313.1-201ENST00000604028 1008 ntBASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 AC004241.3-201ENST00000611728 517 ntBASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 AL136981.2-201ENST00000617319 734 ntBASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.73□□□□□ -2.13
CPSF4LA6NMK7 ZNF658B-202ENST00000615961 3375 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 ATP8A2P3-201ENST00000426792 1536 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 RNU6ATAC37P-201ENST00000408328 131 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 PRELID3BP11-201ENST00000414230 479 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 LINC00353-201ENST00000435401 685 ntTSL 5 BASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 HMGN2P20-201ENST00000437531 273 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 AC090515.1-201ENST00000465295 476 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 AC090096.1-201ENST00000489168 390 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 OR52A4P-203ENST00000498233 1014 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 RPL38P4-201ENST00000502376 214 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 ANXA2P1-201ENST00000505539 926 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 AC096571.1-202ENST00000506634 735 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 RNU6-347P-201ENST00000516658 105 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 SYF2P1-201ENST00000550658 413 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 AC121758.2-201ENST00000553271 193 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 APOOP1-201ENST00000604695 592 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 AC112503.2-201ENST00000609005 552 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 uc_338.20-201ENST00000621563 178 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 TBL1XR1-208ENST00000430069 7948 ntAPPRIS P1 TSL 1 (best) BASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 AC104454.1-201ENST00000421341 1401 ntBASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC1.72□□□□□ -2.13
CPSF4LA6NMK7 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 RNU6-618P-201ENST00000363518 112 ntBASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 SNORA16.1-201ENST00000364597 132 ntBASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 CUBN-201ENST00000377823 705 ntTSL 3 BASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 RPL30P3-201ENST00000424262 333 ntBASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 MTCYBP45-201ENST00000435243 565 ntBASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 UBE2D3P1-201ENST00000436669 444 ntBASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 AL353148.1-201ENST00000449761 463 ntTSL 2 BASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 AC010683.1-201ENST00000473673 378 ntBASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 UBE2DNL-203ENST00000474922 222 ntBASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 AC008716.1-201ENST00000511084 513 ntBASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 AC067852.4-201ENST00000590314 478 ntBASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 AC121761.2-201ENST00000617300 689 ntBASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 AK6-205ENST00000618980 483 ntTSL 2 BASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 AC092650.2-201ENST00000619984 902 ntBASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 AC010149.2-201ENST00000637608 315 ntBASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC1.71□□□□□ -2.14
CPSF4LA6NMK7 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 RNA5SP189-201ENST00000364920 115 ntBASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 HMGN2P38-201ENST00000423806 265 ntBASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 USP9YP36-201ENST00000424581 829 ntBASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 HMGN2P19-201ENST00000425149 265 ntBASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 RPL30P9-201ENST00000465586 330 ntBASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC1.7□□□□□ -2.14
CPSF4LA6NMK7 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 108.9 ms