Protein–RNA interactions for Protein: A6NCW0

USP17L3, Ubiquitin carboxyl-terminal hydrolase 17-like protein 3, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L3A6NCW0 PCDH18-202ENST00000412923 5102 ntAPPRIS ALT1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 FILIP1-203ENST00000393004 7807 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AC027228.2-201ENST00000567141 2154 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 RNA5SP191-201ENST00000362585 102 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 RN7SKP145-201ENST00000363291 303 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 RNU6-1309P-201ENST00000363305 108 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 RNU6-550P-201ENST00000391057 101 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 RNU6-754P-201ENST00000391166 107 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 SOD2P1-201ENST00000396543 562 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 RNU6-954P-201ENST00000411355 107 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 RPL7P10-201ENST00000417407 739 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 C4BPAP2-201ENST00000428434 478 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 DNAJC19P7-201ENST00000428811 344 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AC016712.1-201ENST00000431088 378 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 BX323845.1-201ENST00000432417 179 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AL451139.1-201ENST00000434718 346 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AC010655.1-201ENST00000449336 292 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 MRPS31P2-201ENST00000451581 518 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 GAS5-223ENST00000452197 483 ntTSL 3 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 snoU109.4-201ENST00000458953 143 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 RN7SL354P-201ENST00000469282 294 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 RN7SL432P-201ENST00000484057 298 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AC096736.2-201ENST00000507972 175 ntTSL 3 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 HIGD1AP13-201ENST00000509878 289 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AC005798.1-201ENST00000513715 387 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 LINC02055-204ENST00000521034 432 ntTSL 5 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AC138761.3-201ENST00000579993 334 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 MIR3672-201ENST00000584290 82 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AL157817.1-201ENST00000614264 790 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AC103705.1-201ENST00000619013 241 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AL445363.3-201ENST00000623080 671 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AC008013.2-202ENST00000637965 364 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 ZNF33CP-201ENST00000432492 2030 ntBASIC6.14□□□□□ -1.43
USP17L3A6NCW0 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 ADCY10-201ENST00000367848 5055 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
USP17L3A6NCW0 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 MTND5P19-201ENST00000424872 1794 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 LRRC39-201ENST00000342895 1881 ntAPPRIS P1 TSL 5 BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 RNU11-4P-201ENST00000391149 133 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AL360182.1-201ENST00000397433 468 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AL139397.2-201ENST00000404529 772 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AF186996.5-201ENST00000418098 904 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 TRAPPC2P8-201ENST00000440676 396 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 MTND1P17-201ENST00000448961 204 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AC087385.1-201ENST00000475062 312 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 RN7SKP82-201ENST00000516786 223 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 RN7SKP277-201ENST00000516895 283 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AC009902.1-201ENST00000519351 183 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AC100870.1-201ENST00000522035 505 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AC135001.1-201ENST00000544546 283 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 PYM1-205ENST00000547925 499 ntTSL 3 BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AL670379.6-201ENST00000603753 252 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AL670379.11-201ENST00000604059 253 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AC008162.1-201ENST00000604718 254 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AL670379.1-201ENST00000604752 252 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AL670379.5-201ENST00000605253 252 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AL670379.12-201ENST00000605291 253 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AL670379.8-201ENST00000605353 252 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AL670379.7-201ENST00000605823 252 ntBASIC6.13□□□□□ -1.43
USP17L3A6NCW0 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 NABP1-204ENST00000410026 11521 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 CHRM2-203ENST00000445907 5918 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC6.13□□□□□ -1.43
USP17L3A6NCW0 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 155.6 ms