Protein–RNA interactions for Protein: A0A0B4J266

TRAV41, T-cell receptor alpha variable 41 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV41A0A0B4J266 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 GTF3AP2-201ENST00000557014 266 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 AC106791.2-201ENST00000604680 391 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 RPL23AP88-201ENST00000605759 454 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 AC004696.1-201ENST00000614345 607 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 AC012409.2-201ENST00000619812 751 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 AC024595.1-201ENST00000623088 387 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 LRRC77P-213ENST00000637727 880 ntBASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 PP2D1-202ENST00000389050 2151 ntAPPRIS P1 TSL 5 BASIC2.15□□□□□ -2.07
TRAV41A0A0B4J266 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 OR5J1P-201ENST00000313544 939 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 RNU6-1249P-201ENST00000363237 111 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 SNORD51.1-201ENST00000365405 77 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 RNU6-1226P-201ENST00000384317 107 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 SNORA1.3-201ENST00000384676 136 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 RPS4XP3-201ENST00000398541 413 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 FAT1P1-201ENST00000406588 507 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 SNORD88.1-201ENST00000408684 91 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 RPL19P1-201ENST00000411635 428 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC092745.2-202ENST00000411880 369 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 RAP1BP1-201ENST00000412709 553 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC091390.3-201ENST00000426478 338 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 FABP5P3-201ENST00000437960 408 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 RPS29P6-201ENST00000438196 145 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC114878.1-201ENST00000441166 358 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC024597.1-201ENST00000442753 706 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 UBBP3-201ENST00000445497 241 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 MTND1P33-201ENST00000446251 917 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 RPL23AP20-201ENST00000447965 421 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 OR6K1P-201ENST00000456766 971 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 RPL23AP11-201ENST00000475260 469 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC015908.1-201ENST00000478739 476 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 RPL30P14-201ENST00000482744 348 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 RPS27P23-201ENST00000487608 251 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC096576.1-201ENST00000489014 359 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC009901.1-201ENST00000506703 541 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 SNHG27-202ENST00000507933 491 ntTSL 2 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC098799.2-201ENST00000509466 868 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 MTCO3P44-201ENST00000510977 541 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 LINC01609-201ENST00000519506 424 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC087373.1-201ENST00000524920 491 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 OR4A45P-201ENST00000529954 901 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC026462.2-201ENST00000565771 286 ntTSL 2 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC127540.1-201ENST00000580311 689 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 GLUD1P4-201ENST00000590914 418 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC020895.1-201ENST00000595362 272 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC012119.1-201ENST00000603184 222 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 NUTF2P8-201ENST00000604593 363 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC007619.2-201ENST00000605743 379 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC005046.1-201ENST00000608515 625 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC013468.1-201ENST00000608680 598 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC069234.5-201ENST00000611056 416 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC002064.3-201ENST00000623448 346 ntBASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC092442.1-201ENST00000636216 138 ntAPPRIS P1 TSL 5 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 FAM46D-201ENST00000308293 3011 ntAPPRIS P1 TSL 1 (best) BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 IL33-203ENST00000456383 2501 ntTSL 5 BASIC2.14□□□□□ -2.07
TRAV41A0A0B4J266 AC092447.7-201ENST00000422212 1621 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 OR2J3-203ENST00000641960 3342 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 SNORA80A-201ENST00000363922 136 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 SNORD56.5-201ENST00000364281 72 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 RNU1-109P-201ENST00000383960 147 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 MIR9-1-201ENST00000385198 89 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 OR5H8-201ENST00000394191 1045 ntAPPRIS P1 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 PNRC2P1-201ENST00000423940 420 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 AC093843.1-201ENST00000424395 512 ntTSL 2 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 MORF4L1P7-201ENST00000426038 703 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 AL590999.1-206ENST00000437947 436 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 RPL23AP23-201ENST00000452590 471 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 SETP11-201ENST00000473027 690 ntBASIC2.13□□□□□ -2.07
TRAV41A0A0B4J266 RPS27AP9-201ENST00000477681 438 ntBASIC2.13□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms