Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 SRD5A3-AS1-209ENST00000598819 552 ntTSL 5 BASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 CEACAM7-204ENST00000602225 524 ntTSL 1 (best) BASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 MIR98-201ENST00000606724 119 ntBASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC211433.2-201ENST00000608433 387 ntBASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC004067.1-201ENST00000608733 700 ntBASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 BX664608.1-201ENST00000610519 487 ntBASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 AL133173.2-201ENST00000614270 90 ntBASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 AL596245.1-201ENST00000618994 362 ntBASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 ALG13-230ENST00000623189 458 ntTSL 3 BASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC015908.5-201ENST00000623289 343 ntBASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC091905.1-201ENST00000624400 311 ntBASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 ANKRD36C-202ENST00000456556 5428 ntAPPRIS P1 TSL 5 BASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC116667.1-201ENST00000604855 2072 ntBASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.85□□□□□ -1.79
TRBV5-3A0A0A0MS03 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 KCNE2-201ENST00000290310 1051 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 RNU1-132P-201ENST00000364300 164 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 Y_RNA.234-201ENST00000364409 97 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AKAP14-204ENST00000371431 977 ntAPPRIS P3 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 RNU1-89P-201ENST00000384592 164 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 RPL23AP32-201ENST00000395315 459 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 TANK-204ENST00000403609 555 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 RAP1BP3-201ENST00000407180 549 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 MTND3P17-201ENST00000416968 344 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC133104.1-201ENST00000429100 218 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 MTCO2P11-201ENST00000431069 680 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 RPL23AP46-201ENST00000438548 490 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AL589765.1-201ENST00000457548 386 ntTSL 2 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 RPL35AP28-201ENST00000459730 331 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC023598.1-201ENST00000472521 361 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC087385.1-201ENST00000475062 312 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 RN7SL271P-201ENST00000487601 295 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 RPL32P9-201ENST00000487963 407 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC105914.1-201ENST00000511798 226 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC099522.1-202ENST00000514718 367 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 Vault.3-201ENST00000516676 95 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 RN7SKP82-201ENST00000516786 223 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AK6P1-201ENST00000540219 478 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC107954.1-201ENST00000565906 727 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 LINC01899-201ENST00000580323 312 ntTSL 5 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 YWHAQP7-201ENST00000603536 658 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC055876.5-201ENST00000605667 259 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 ATXN3-251ENST00000617719 1074 ntTSL 5 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 RN7SL722P-201ENST00000617780 284 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 RN7SL565P-201ENST00000618246 284 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC006338.1-201ENST00000618453 749 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC009704.2-201ENST00000618739 483 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 AC099654.14-201ENST00000638599 341 ntBASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.84□□□□□ -1.79
TRBV5-3A0A0A0MS03 CAST-207ENST00000395813 4356 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.8
TRBV5-3A0A0A0MS03 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC3.84□□□□□ -1.8
TRBV5-3A0A0A0MS03 FAM35DP-201ENST00000323387 2712 ntBASIC3.84□□□□□ -1.8
TRBV5-3A0A0A0MS03 FMO2-201ENST00000209929 3851 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRBV5-3A0A0A0MS03 AGTR2-201ENST00000371906 2882 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.8
TRBV5-3A0A0A0MS03 NUP58P1-201ENST00000502546 1738 ntBASIC3.84□□□□□ -1.8
TRBV5-3A0A0A0MS03 IPO8P1-201ENST00000455509 3109 ntBASIC3.84□□□□□ -1.8
TRBV5-3A0A0A0MS03 SAGE2P-201ENST00000420011 2126 ntBASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 STEAP2-203ENST00000394622 6612 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 GABPB1-AS1-202ENST00000499624 16182 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 EMSY-215ENST00000533248 3798 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 RNA5SP258-201ENST00000362750 119 ntBASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 RNU6-97P-201ENST00000363387 104 ntBASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 RNA5SP505-201ENST00000364748 108 ntBASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 Y_RNA.303-201ENST00000364998 94 ntBASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 Y_RNA.409-201ENST00000383990 98 ntBASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 RNU2-15P-201ENST00000410692 191 ntBASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 ELOCP19-201ENST00000411919 318 ntBASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC3.83□□□□□ -1.8
TRBV5-3A0A0A0MS03 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC3.83□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms