Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 FTLP6-201ENST00000355274 422 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 SNORA5B-201ENST00000363786 132 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 MIR1250-201ENST00000408098 113 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 AL603910.1-201ENST00000423099 370 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 NANOGP5-201ENST00000424456 877 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 MTATP6P11-201ENST00000428071 670 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 RPL23AP83-201ENST00000434984 473 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 CR769767.1-201ENST00000436337 346 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 ARL5AP3-201ENST00000439327 386 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 LINC01192-207ENST00000492553 836 ntTSL 5 BASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 AC234781.5-201ENST00000508429 271 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 RNU4-29P-201ENST00000515943 174 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 SNORA31.15-201ENST00000516771 132 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 RPL7P20-201ENST00000520308 745 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 AC023158.1-201ENST00000561632 1025 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 AC025281.1-201ENST00000567026 265 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 AC105137.2-201ENST00000569073 466 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 AL157786.1-204ENST00000594870 506 ntTSL 3 BASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 AC046143.2-201ENST00000609789 160 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 AC007336.1-201ENST00000576365 3828 ntBASIC2.1□□□□□ -2.07
TRAV27A0A087WT01 AC016717.2-201ENST00000609089 5141 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 CSN3-201ENST00000304954 836 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 RNU6-1180P-201ENST00000364935 107 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 RNU1-138P-201ENST00000384093 164 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 MIR483-201ENST00000385070 76 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 MTATP6P31-201ENST00000406985 692 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 U3.37-201ENST00000408528 213 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 AF274854.1-201ENST00000413236 615 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 UBE2D3P2-201ENST00000424409 445 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 ATP5F1P1-201ENST00000433775 569 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 MTCO3P17-201ENST00000443775 513 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 AC005002.1-201ENST00000447458 540 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 AC016065.2-201ENST00000514530 444 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 ERHP1-201ENST00000523006 310 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 LINC01467-201ENST00000554211 1187 ntTSL 1 (best) BASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 COX6CP3-201ENST00000580869 223 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 AC245036.5-201ENST00000596330 847 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 RPL23AP92-201ENST00000603609 255 ntBASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 AC026523.1-201ENST00000617221 490 ntTSL 5 BASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC2.09□□□□□ -2.07
TRAV27A0A087WT01 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC2.09□□□□□ -2.08
TRAV27A0A087WT01 RGPD1-204ENST00000559485 5247 ntAPPRIS P2 TSL 1 (best) BASIC2.09□□□□□ -2.08
TRAV27A0A087WT01 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
TRAV27A0A087WT01 RNA5SP393-201ENST00000363423 117 ntBASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 RN7SKP140-201ENST00000411196 284 ntBASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 MTCO3P4-201ENST00000419236 787 ntBASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AL606495.1-201ENST00000422100 813 ntBASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 TRAPPC13P1-201ENST00000435991 1062 ntBASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 LINC01307-201ENST00000439146 474 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AL627224.1-201ENST00000448334 444 ntBASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AC020703.1-201ENST00000505051 521 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AC093689.1-203ENST00000505967 299 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AC105914.1-201ENST00000511798 226 ntBASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 SNORA31.20-201ENST00000517111 133 ntBASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 LINC02143-201ENST00000519929 520 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AC090802.1-201ENST00000520870 445 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AP001999.2-201ENST00000529417 389 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 LINC01479-201ENST00000545520 509 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AC006023.1-201ENST00000603944 259 ntBASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 NUTF2P8-201ENST00000604593 363 ntBASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AC106791.2-201ENST00000604680 391 ntBASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AL359535.1-201ENST00000612100 1087 ntBASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AL121594.5-201ENST00000631724 573 ntBASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 AC099654.7-201ENST00000635788 2127 ntBASIC2.08□□□□□ -2.08
TRAV27A0A087WT01 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
TRAV27A0A087WT01 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRAV27A0A087WT01 AC005336.3-201ENST00000623833 2679 ntBASIC2.07□□□□□ -2.08
TRAV27A0A087WT01 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC2.07□□□□□ -2.08
TRAV27A0A087WT01 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
TRAV27A0A087WT01 AL031679.1-201ENST00000400616 525 ntBASIC2.07□□□□□ -2.08
TRAV27A0A087WT01 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.07□□□□□ -2.08
TRAV27A0A087WT01 RNU2-25P-201ENST00000411041 191 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms