Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 AL590410.1-201ENST00000617925 333 ntBASIC1.97□□□□□ -2.09
HLA-DRB4X5D2U9 AP004607.9-201ENST00000618202 316 ntBASIC1.97□□□□□ -2.09
HLA-DRB4X5D2U9 VN1R7P-201ENST00000619242 903 ntBASIC1.97□□□□□ -2.09
HLA-DRB4X5D2U9 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DRB4X5D2U9 SEC23A-215ENST00000625395 261 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DRB4X5D2U9 LIFR-201ENST00000263409 10089 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DRB4X5D2U9 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC1.97□□□□□ -2.09
HLA-DRB4X5D2U9 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC1.97□□□□□ -2.09
HLA-DRB4X5D2U9 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC1.97□□□□□ -2.09
HLA-DRB4X5D2U9 ZNF734P-201ENST00000419494 1534 ntBASIC1.96□□□□□ -2.09
HLA-DRB4X5D2U9 AC109315.1-201ENST00000584143 1347 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 ZBBX-201ENST00000307529 3071 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 ZBBX-204ENST00000392767 3071 ntAPPRIS ALT2 TSL 5 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 RPS4XP3-201ENST00000398541 413 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 SFR1P1-201ENST00000403720 688 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 TANK-206ENST00000406287 875 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 USP9YP27-201ENST00000418455 438 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 AC000041.1-201ENST00000439655 175 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 AL513321.1-201ENST00000441175 761 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 RPL34P26-201ENST00000445636 354 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 AL590664.1-201ENST00000448065 339 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 NAMPTP2-201ENST00000505629 1115 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 IGHVII-62-1-201ENST00000519283 235 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 AC008562.1-201ENST00000521763 330 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 AC100870.1-201ENST00000522035 505 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 COX6CP8-201ENST00000522620 226 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 OR4R1P-201ENST00000529879 463 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 OR5BN1P-201ENST00000532955 829 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 SMILR-201ENST00000533992 553 ntTSL 4 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 AP002373.1-201ENST00000544347 729 ntAPPRIS P1 TSL 3 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 AL049874.4-201ENST00000557593 255 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 ATP1B3P1-201ENST00000605365 821 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 AL513477.2-201ENST00000607858 568 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 DAOA-AS1_2.2-201ENST00000610818 204 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 AC092650.2-201ENST00000619984 902 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 CENPK-201ENST00000242872 1576 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 CUL1P1-201ENST00000509510 2425 ntBASIC1.96□□□□□ -2.1
HLA-DRB4X5D2U9 IL33-203ENST00000456383 2501 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AC135776.4-201ENST00000624300 1904 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AC093536.2-201ENST00000565257 1406 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 OR5J1P-201ENST00000313544 939 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 RNU6-263P-201ENST00000363811 107 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 RNU6-1243P-201ENST00000364028 107 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 DEFB119-202ENST00000376315 324 ntAPPRIS ALT2 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 FAT1P1-201ENST00000406588 507 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 MTCO3P12-201ENST00000416718 547 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 RPL7P37-201ENST00000425095 738 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 RPS15AP7-201ENST00000439294 405 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AL365295.1-201ENST00000454942 514 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AC023424.2-201ENST00000493479 777 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AC107222.1-201ENST00000510899 637 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AC008716.1-201ENST00000511084 513 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AC096725.1-201ENST00000514266 313 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 RNA5SP282-201ENST00000516355 108 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 COX6B1P6-201ENST00000522347 255 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 ARL1-211ENST00000551828 776 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AL049870.4-201ENST00000555741 486 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 GTF3AP2-201ENST00000557014 266 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AC003009.1-201ENST00000571611 686 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 LARP7P3-201ENST00000579888 337 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 TTN-AS1-212ENST00000582847 1036 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AC008739.2-201ENST00000597006 317 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AL138880.2-201ENST00000616214 239 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 DLEU1_1.1-201ENST00000618107 190 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AC006386.2-201ENST00000624491 75 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AC012005.1-201ENST00000624575 75 ntBASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 CENPE-201ENST00000265148 8612 ntAPPRIS P1 TSL 2 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 KIAA1841-211ENST00000612149 4202 ntTSL 5 BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC1.95□□□□□ -2.1
HLA-DRB4X5D2U9 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 CNBD1-202ENST00000518476 1594 ntAPPRIS P2 TSL 1 (best) BASIC1.94□□□□□ -2.1
HLA-DRB4X5D2U9 RNU4-31P-201ENST00000384211 141 ntBASIC1.94□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 136.9 ms