Protein–RNA interactions for Protein: Q9Y6R9

CCDC61, Coiled-coil domain-containing protein 61, humanhuman

Predictions only

Length 512 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61Q9Y6R9 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 PTMAP6-201ENST00000439110 327 ntBASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 HMGN2P13-201ENST00000476476 274 ntBASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 AC006539.1-201ENST00000481419 501 ntBASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 AC008953.1-201ENST00000497334 318 ntBASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 CYCTP-201ENST00000504253 315 ntBASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 AC093840.1-201ENST00000511599 336 ntBASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 RNU6-426P-201ENST00000516464 97 ntBASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 DEFB131B-201ENST00000530210 213 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 AC010177.1-201ENST00000547819 366 ntTSL 3 BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 MIR4301-201ENST00000577203 66 ntBASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 AC132068.1-201ENST00000623805 459 ntBASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 ATMIN-204ENST00000564241 4803 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 MIA3-201ENST00000340535 2735 ntTSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.88□□□□□ -1.15
CCDC61Q9Y6R9 AP1M1-201ENST00000291439 13193 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 KMT2A-213ENST00000534358 16602 ntAPPRIS ALT2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 AC087516.1-201ENST00000561236 2428 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 SNORA74A-201ENST00000364089 198 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 SNORA70-201ENST00000384436 135 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 Y_RNA.504-201ENST00000384481 104 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 SNORD73A-201ENST00000386062 65 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 RNU6-325P-201ENST00000411132 105 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 RPS15AP6-201ENST00000420703 385 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 RPL36P19-201ENST00000430744 301 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 AC073063.1-201ENST00000434352 607 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 OR6D1P-201ENST00000436165 939 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 CYCSP12-201ENST00000437729 300 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 RPS26P56-201ENST00000444468 240 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 RN7SL610P-201ENST00000463845 291 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 AC022034.3-201ENST00000471393 478 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 RN7SKP98-201ENST00000517070 156 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 AP006245.1-201ENST00000522549 120 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 AC107958.3-201ENST00000553410 431 ntTSL 3 BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 H3F3AP1-201ENST00000559984 334 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 MIR4282-201ENST00000583613 67 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 AC068790.4-201ENST00000602474 263 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 MIR3976-201ENST00000606807 139 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 AL008718.3-201ENST00000610217 321 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 MIR7155-201ENST00000615925 56 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 AC118658.2-201ENST00000618697 459 ntBASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 XRCC5-201ENST00000392132 3428 ntAPPRIS P1 TSL 1 (best) BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC7.87□□□□□ -1.15
CCDC61Q9Y6R9 DMXL1-215ENST00000539542 11236 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 OAS2-201ENST00000342315 3613 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 CDKAL1-202ENST00000378610 3115 ntAPPRIS P1 TSL 2 BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 SLC39A12-201ENST00000377369 2808 ntAPPRIS ALT1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 HSP90AA5P-201ENST00000438353 2192 ntBASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 DROSHA-212ENST00000511367 5305 ntAPPRIS P4 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 CLEC7A-205ENST00000353231 2446 ntAPPRIS P3 TSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 RNU6-595P-201ENST00000363944 107 ntBASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 RNU6-326P-201ENST00000365480 107 ntBASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 AL513475.1-201ENST00000406602 315 ntBASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 MTCO1P39-201ENST00000426148 480 ntBASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 RBMY2TP-201ENST00000451162 947 ntBASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 RNU1-88P-201ENST00000459274 128 ntBASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 AC005532.2-201ENST00000467154 373 ntBASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 AC231760.1-201ENST00000498002 260 ntBASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 WWC2-AS1-201ENST00000511846 404 ntTSL 1 (best) BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 MIR4679-2-201ENST00000578358 77 ntBASIC7.86□□□□□ -1.15
CCDC61Q9Y6R9 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC7.86□□□□□ -1.15
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms