Protein–RNA interactions for Protein: Q9Y5Q9

GTF3C3, General transcription factor 3C polypeptide 3, humanhuman

Predictions only

Length 886 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3Q9Y5Q9 RNU6-451P-201ENST00000362921 107 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 RNA5SP232-201ENST00000364144 119 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 RNY3P14-201ENST00000384309 102 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 MIR138-2-201ENST00000384916 84 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 MRPL32P1-201ENST00000406301 247 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 MIR1266-201ENST00000408125 84 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 RNA5SP198-201ENST00000410376 127 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 RN7SKP100-201ENST00000411258 284 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 OR9R1P-201ENST00000412200 877 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 PRPF38AP2-201ENST00000438179 851 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 AC005297.1-201ENST00000444765 862 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 SNRPFP3-201ENST00000457792 225 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 RN7SL799P-201ENST00000475891 298 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 TRBV1-201ENST00000476502 284 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 SNORA31.3-201ENST00000516029 96 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 OR5B19P-201ENST00000531766 928 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 MFAP5-212ENST00000543369 972 ntTSL 3 BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 AL121579.1-201ENST00000555129 305 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 AC005951.2-201ENST00000576282 495 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 AC015917.1-201ENST00000579654 510 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 AC067852.3-201ENST00000589177 561 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 AC008638.3-201ENST00000603341 463 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 AL049634.3-201ENST00000604968 457 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 AP001521.2-201ENST00000608772 546 ntBASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 DNAH8-205ENST00000449981 12940 ntTSL 5 BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 DLX6-AS1-201ENST00000430027 15364 ntTSL 2 BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 HDAC9-204ENST00000406451 9705 ntAPPRIS ALT1 TSL 1 (best) BASIC6.62□□□□□ -1.35
GTF3C3Q9Y5Q9 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 AL139276.1-201ENST00000311910 1001 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 SNORA2.3-201ENST00000383920 135 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 Y_RNA.576-201ENST00000384781 102 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 RNA5SP129-201ENST00000410276 118 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 RNA5SP231-201ENST00000410496 138 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 SDHDP6-201ENST00000414693 480 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 AL109913.1-201ENST00000421173 514 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 RPL7AP51-201ENST00000422016 760 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 AC004938.1-201ENST00000438468 308 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 SPRYD7P1-201ENST00000443861 570 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 RPS27AP17-201ENST00000463344 455 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 AC010350.1-201ENST00000504908 231 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 AC091885.1-201ENST00000506658 268 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 AC090572.3-201ENST00000519041 804 ntTSL 3 BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 TRIM77BP-201ENST00000524985 1119 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 AC103843.2-201ENST00000530523 682 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 OR5B10P-201ENST00000532869 642 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 LINC02408-202ENST00000538573 559 ntTSL 4 BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 MIR3690-201ENST00000580266 75 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 MIR212-201ENST00000586026 110 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 CDC42EP3P1-201ENST00000601004 764 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 LINC02362-201ENST00000608785 516 ntTSL 3 BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 LINC02362-202ENST00000610683 724 ntTSL 5 BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 AP003122.6-201ENST00000623831 495 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 AC024614.3-201ENST00000637860 256 ntBASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 GHR-213ENST00000622294 4312 ntTSL 5 BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 UTP20-201ENST00000261637 9025 ntAPPRIS P1 TSL 1 (best) BASIC6.61□□□□□ -1.35
GTF3C3Q9Y5Q9 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 PABPC1P6-201ENST00000445594 1829 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 OR4G2P-202ENST00000641004 1759 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 RPL7P26-201ENST00000333817 754 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 RNU6-903P-201ENST00000391270 109 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 U3.35-201ENST00000408405 208 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 RNU6-1068P-201ENST00000410958 103 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 AC009237.5-201ENST00000414271 501 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 AC138393.2-201ENST00000414742 246 ntBASIC6.6□□□□□ -1.35
GTF3C3Q9Y5Q9 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.6□□□□□ -1.35
Retrieved 100 of 98,524 protein–RNA pairs in 125.8 ms