Protein–RNA interactions for Protein: Q9Y2N7

HIF3A, Hypoxia-inducible factor 3-alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3AQ9Y2N7 AC005042.1-201ENST00000393397 800 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AL445189.1-201ENST00000405722 338 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 RN7SKP159-201ENST00000410657 292 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AC096664.2-201ENST00000411843 406 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 MRPS21P2-201ENST00000424704 264 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 RPS26P47-201ENST00000427219 348 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 RPL21P91-201ENST00000429231 479 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AC126120.1-201ENST00000431082 470 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 TMEM183AP1-205ENST00000432739 290 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 PTCHD1-AS-201ENST00000455399 718 ntTSL 3 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 RN7SL197P-201ENST00000466981 299 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 RPL23AP55-201ENST00000498163 452 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 MTCO3P44-201ENST00000510977 541 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 LINC02014-201ENST00000514010 713 ntTSL 3 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AC097486.1-201ENST00000515331 210 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 RNU6-1023P-201ENST00000516137 106 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 DEFB108D-201ENST00000527787 222 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AP000648.1-201ENST00000529682 397 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 RANP3-201ENST00000530970 276 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AC079905.1-201ENST00000549280 475 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AC112481.1-201ENST00000549669 901 ntTSL 2 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AC008162.1-201ENST00000604718 254 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AL670379.4-201ENST00000605279 254 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AC096772.1-201ENST00000609146 564 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AC090607.5-201ENST00000615692 224 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AC024884.1-201ENST00000620583 399 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 DTNA-203ENST00000315456 1706 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 RAD17-220ENST00000616683 3057 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AC093849.1-201ENST00000563631 2209 ntBASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 TEK-205ENST00000615002 4666 ntTSL 5 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 AGO2-201ENST00000220592 14581 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
HIF3AQ9Y2N7 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 OR4F13P-202ENST00000560066 2054 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 IFIT2-203ENST00000638108 3703 ntAPPRIS P2 TSL 5 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AL353796.1-201ENST00000561542 3241 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AC083899.1-201ENST00000454465 3819 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 DIAPH3-208ENST00000498416 2249 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AL121886.1-201ENST00000358609 435 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 RNA5SP273-201ENST00000362484 113 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 Y_RNA.26-201ENST00000362539 101 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 RNU6-128P-201ENST00000383976 107 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 MIR1252-201ENST00000408861 65 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 RNU6-55P-201ENST00000411092 107 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AC096921.1-201ENST00000411661 375 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 RPLP0P7-201ENST00000416050 667 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AL391807.1-202ENST00000419979 534 ntTSL 2 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 PIGPP3-201ENST00000425307 415 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 FAR2P4-202ENST00000425399 584 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 LINC02210-201ENST00000444561 288 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AL021940.1-201ENST00000454271 677 ntTSL 2 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AC133473.1-201ENST00000455173 299 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 RPL9P32-201ENST00000464118 620 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 RPS23P3-201ENST00000470993 430 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AC108860.1-201ENST00000484521 383 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 RPL7P51-201ENST00000490532 749 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AC105919.1-201ENST00000507203 393 ntTSL 3 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 SNORA14.1-201ENST00000516113 141 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 RNA5SP228-201ENST00000516232 133 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 RNA5SP473-201ENST00000516402 125 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 RNA5SP438-201ENST00000516561 112 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 RNU6-1069P-201ENST00000516612 133 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 Y_RNA.715-201ENST00000517082 110 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AC100870.1-201ENST00000522035 505 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 IGLV3-30-201ENST00000524362 298 ntBASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC5.12□□□□□ -1.59
HIF3AQ9Y2N7 RPL23AP84-201ENST00000571193 464 ntBASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms