Protein–RNA interactions for Protein: Q9UMD9

COL17A1, Collagen alpha-1(XVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,497 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1Q9UMD9 SNRPFP4-201ENST00000456366 242 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 AC008155.2-201ENST00000464337 397 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 RPL7P22-201ENST00000466005 733 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 Y_RNA.704-201ENST00000516851 102 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 AC040936.1-201ENST00000534543 172 ntTSL 5 BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 AC018630.1-201ENST00000541376 925 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 CYCSP30-201ENST00000546447 172 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 MIR548AB-201ENST00000584917 84 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 AC022106.2-201ENST00000620114 757 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 MIR1302-1-201ENST00000637932 143 ntBASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 WDR63-203ENST00000370596 2905 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
COL17A1Q9UMD9 AC021242.1-201ENST00000507315 2035 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 DCAF13P1-201ENST00000495256 1330 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 PTPN22-201ENST00000359785 3654 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 PRKAA2-201ENST00000371244 9347 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 HSPA8P17-201ENST00000427029 1382 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 RAPGEF2-201ENST00000264431 6949 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 Y_RNA.476-201ENST00000384347 108 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 RNU6-1263P-201ENST00000384601 106 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 RNU6-1222P-201ENST00000384615 107 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 Y_RNA.618-201ENST00000410949 107 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 PIGPP2-201ENST00000411569 458 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 RPL17P12-201ENST00000413391 526 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 HMGB3P23-201ENST00000414981 585 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 USP9YP27-201ENST00000418455 438 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 BLOC1S2P1-201ENST00000428431 301 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 HSPD1P21-201ENST00000436541 245 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 AL591501.1-201ENST00000439992 495 ntTSL 5 BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 AC092757.1-201ENST00000467293 467 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 RNU6-1271P-201ENST00000517049 105 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 AP005902.1-201ENST00000521358 186 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 YPEL5P3-201ENST00000547227 352 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 AC011816.2-201ENST00000607089 556 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 AC092807.2-201ENST00000609367 243 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 AL590282.1-201ENST00000610379 1136 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 MIR6868-201ENST00000611215 58 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 AL139089.1-201ENST00000620372 975 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 AC090971.5-201ENST00000621102 293 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 AL359880.1-201ENST00000621879 266 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 DCAF13P3-201ENST00000561147 1334 ntBASIC6.26□□□□□ -1.41
COL17A1Q9UMD9 AC114546.3-201ENST00000623582 1734 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 ABI2-204ENST00000295851 22209 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 ESD-201ENST00000378697 1079 ntTSL 5 BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 RNU6-209P-201ENST00000384118 107 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 RNU6-767P-201ENST00000384132 107 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 MIR490-201ENST00000384865 128 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 LSM5-205ENST00000409952 687 ntTSL 4 BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 RNU2-62P-201ENST00000410868 191 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 AL391219.1-201ENST00000422570 483 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 AC024082.2-201ENST00000434771 238 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 UBE2FP3-201ENST00000436366 524 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 RPS26P30-201ENST00000443431 335 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 LINC01150-201ENST00000455671 315 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 PSMC1P13-201ENST00000458195 985 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 RPL38P1-201ENST00000460914 211 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 AP001189.2-201ENST00000527320 189 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 AL157955.1-201ENST00000554433 331 ntTSL 3 BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 HMGB1P33-201ENST00000563485 527 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 AC110743.1-201ENST00000584870 478 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 VN1R80P-201ENST00000597126 338 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 ZNF432-203ENST00000597273 624 ntTSL 2 BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 AC007687.1-201ENST00000602704 304 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 AC113139.1-201ENST00000605049 239 ntBASIC6.25□□□□□ -1.41
COL17A1Q9UMD9 AC137590.2-201ENST00000619709 240 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 103 ms