Protein–RNA interactions for Protein: Q9ULB4

CDH9, Cadherin-9, humanhuman

Predictions only

Length 789 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9Q9ULB4 AC017099.1-201ENST00000448261 1028 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 NANOGNBP1-201ENST00000448444 480 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AC140076.1-201ENST00000449897 361 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 TEX41-209ENST00000451478 452 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AC091179.1-201ENST00000461606 579 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 RPL7P23-201ENST00000493874 747 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AC093767.1-201ENST00000504523 156 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 RNU5A-7P-201ENST00000515979 116 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AC022080.3-201ENST00000544433 482 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 SULT1C2P1-202ENST00000562418 459 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AC007953.2-201ENST00000603299 193 ntTSL 5 BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AL590426.2-201ENST00000607287 786 ntTSL 3 BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AC093732.2-201ENST00000607950 274 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AL451074.6-201ENST00000608512 729 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AC107294.3-201ENST00000609211 526 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AL390240.1-201ENST00000612950 384 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 ATP5A1P2-202ENST00000616464 443 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 VN1R7P-201ENST00000619242 903 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AL590240.3-201ENST00000621416 943 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 AC068880.4-201ENST00000623082 495 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.22□□□□□ -1.89
CDH9Q9ULB4 NUP58P1-201ENST00000502546 1738 ntBASIC3.22□□□□□ -1.89
CDH9Q9ULB4 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.21□□□□□ -1.89
CDH9Q9ULB4 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.21□□□□□ -1.89
CDH9Q9ULB4 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 MAPK10-362ENST00000641864 4484 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AC073325.2-201ENST00000339545 159 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 RNU1-101P-201ENST00000391171 127 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 UBA52P6-201ENST00000399822 382 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AL133264.1-201ENST00000407157 562 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 RNU4-65P-201ENST00000410473 140 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AL136133.1-201ENST00000413694 376 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 HMGB3P6-201ENST00000444896 598 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AC104308.1-201ENST00000454621 333 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AC117440.1-201ENST00000474107 571 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AC006483.1-201ENST00000487308 313 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AC126177.3-201ENST00000551839 688 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 MTCO3P24-201ENST00000572729 782 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AC116003.2-201ENST00000579278 748 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AP001542.2-201ENST00000593141 364 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AP000238.1-201ENST00000608759 426 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 VIS1.1-201ENST00000610517 203 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 RASSF8-215ENST00000611440 852 ntTSL 5 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 ZNF663P-202ENST00000641770 1131 ntBASIC3.21□□□□□ -1.9
CDH9Q9ULB4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
CDH9Q9ULB4 AC110774.1-201ENST00000623567 2018 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AL035425.3-201ENST00000564206 4996 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 SNORA51.6-201ENST00000384151 125 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 SNORA44-201ENST00000384584 132 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 U3.29-201ENST00000391296 212 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 NDUFB4P4-201ENST00000404822 243 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AL354719.1-201ENST00000406535 843 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 STAT4-203ENST00000409995 709 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH9Q9ULB4 HMGB3P23-201ENST00000414981 585 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AC027644.1-201ENST00000419595 298 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 YPEL5P1-201ENST00000419731 367 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH9Q9ULB4 DUTP6-201ENST00000425573 462 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 MTCYBP32-201ENST00000427945 1084 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 RABEPKP1-201ENST00000440529 1026 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH9Q9ULB4 RN7SL20P-201ENST00000488827 297 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH9Q9ULB4 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AC019227.1-201ENST00000526902 510 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AP001317.1-201ENST00000531194 960 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AL451007.1-201ENST00000595491 289 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AL109653.1-201ENST00000603091 248 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AP003973.1-201ENST00000604639 691 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AP005137.2-201ENST00000609238 400 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 CYCSP41-201ENST00000616920 296 ntBASIC3.2□□□□□ -1.9
CDH9Q9ULB4 AL360181.4-201ENST00000621752 134 ntBASIC3.2□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 100 ms